Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL354714.5-201ENST00000450131 590 ntBASIC6.13□□□□□ -1.43
CBX1P83916 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.13□□□□□ -1.43
CBX1P83916 RPL19P11-201ENST00000495944 589 ntBASIC6.13□□□□□ -1.43
CBX1P83916 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.13□□□□□ -1.43
CBX1P83916 EIF3KP1-201ENST00000513279 656 ntBASIC6.13□□□□□ -1.43
CBX1P83916 IGLC4-201ENST00000517690 248 ntBASIC6.13□□□□□ -1.43
CBX1P83916 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CBX1P83916 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.13□□□□□ -1.43
CBX1P83916 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.13□□□□□ -1.43
CBX1P83916 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.13□□□□□ -1.43
CBX1P83916 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CBX1P83916 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.13□□□□□ -1.43
CBX1P83916 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.13□□□□□ -1.43
CBX1P83916 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CBX1P83916 MIR4786-201ENST00000583954 80 ntBASIC6.13□□□□□ -1.43
CBX1P83916 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CBX1P83916 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CBX1P83916 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.13□□□□□ -1.43
CBX1P83916 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.13□□□□□ -1.43
CBX1P83916 AC073857.1-201ENST00000625082 1054 ntBASIC6.13□□□□□ -1.43
CBX1P83916 PSMC1P6-201ENST00000477233 1319 ntBASIC6.13□□□□□ -1.43
CBX1P83916 QRSL1P3-201ENST00000552666 1316 ntBASIC6.13□□□□□ -1.43
CBX1P83916 SMG1P7-201ENST00000565246 2704 ntBASIC6.13□□□□□ -1.43
CBX1P83916 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CBX1P83916 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CBX1P83916 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CBX1P83916 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.13□□□□□ -1.43
CBX1P83916 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.13□□□□□ -1.43
CBX1P83916 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.13□□□□□ -1.43
CBX1P83916 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CBX1P83916 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CBX1P83916 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CBX1P83916 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CBX1P83916 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CBX1P83916 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CBX1P83916 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CBX1P83916 SNORA43.1-201ENST00000364863 140 ntBASIC6.12□□□□□ -1.43
CBX1P83916 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CBX1P83916 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CBX1P83916 AL391419.1-201ENST00000398901 1275 ntBASIC6.12□□□□□ -1.43
CBX1P83916 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.12□□□□□ -1.43
CBX1P83916 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.12□□□□□ -1.43
CBX1P83916 OR6C64P-201ENST00000419708 825 ntBASIC6.12□□□□□ -1.43
CBX1P83916 AL157884.1-201ENST00000424561 454 ntBASIC6.12□□□□□ -1.43
CBX1P83916 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CBX1P83916 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.12□□□□□ -1.43
CBX1P83916 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.12□□□□□ -1.43
CBX1P83916 AC105052.2-201ENST00000434317 794 ntBASIC6.12□□□□□ -1.43
CBX1P83916 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.12□□□□□ -1.43
CBX1P83916 OR52E3P-201ENST00000452083 936 ntBASIC6.12□□□□□ -1.43
CBX1P83916 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.12□□□□□ -1.43
CBX1P83916 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CBX1P83916 AC010343.2-201ENST00000510162 224 ntBASIC6.12□□□□□ -1.43
CBX1P83916 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.12□□□□□ -1.43
CBX1P83916 OR7E1P-201ENST00000533891 958 ntBASIC6.12□□□□□ -1.43
CBX1P83916 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.12□□□□□ -1.43
CBX1P83916 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.12□□□□□ -1.43
CBX1P83916 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.12□□□□□ -1.43
CBX1P83916 AC007066.2-202ENST00000566531 914 ntBASIC6.12□□□□□ -1.43
CBX1P83916 BOLA2P1-201ENST00000584794 232 ntBASIC6.12□□□□□ -1.43
CBX1P83916 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.12□□□□□ -1.43
CBX1P83916 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.12□□□□□ -1.43
CBX1P83916 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.12□□□□□ -1.43
CBX1P83916 AL078621.3-201ENST00000623707 2042 ntBASIC6.12□□□□□ -1.43
CBX1P83916 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.12□□□□□ -1.43
CBX1P83916 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.12□□□□□ -1.43
CBX1P83916 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CBX1P83916 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
CBX1P83916 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.12□□□□□ -1.43
CBX1P83916 AC021242.1-201ENST00000507315 2035 ntBASIC6.11□□□□□ -1.43
CBX1P83916 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CBX1P83916 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CBX1P83916 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.11□□□□□ -1.43
CBX1P83916 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.11□□□□□ -1.43
CBX1P83916 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.11□□□□□ -1.43
CBX1P83916 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.11□□□□□ -1.43
CBX1P83916 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CBX1P83916 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CBX1P83916 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CBX1P83916 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
CBX1P83916 RNA5SP279-201ENST00000365513 117 ntBASIC6.11□□□□□ -1.43
CBX1P83916 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CBX1P83916 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CBX1P83916 U3.28-201ENST00000391249 210 ntBASIC6.11□□□□□ -1.43
CBX1P83916 RNA5SP53-201ENST00000391299 120 ntBASIC6.11□□□□□ -1.43
CBX1P83916 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.11□□□□□ -1.43
CBX1P83916 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC6.11□□□□□ -1.43
CBX1P83916 SETP15-201ENST00000412724 337 ntBASIC6.11□□□□□ -1.43
CBX1P83916 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CBX1P83916 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC6.11□□□□□ -1.43
CBX1P83916 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
CBX1P83916 MYB-206ENST00000420123 1051 ntTSL 5 BASIC6.11□□□□□ -1.43
CBX1P83916 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC6.11□□□□□ -1.43
CBX1P83916 CYP4F34P-201ENST00000425951 481 ntBASIC6.11□□□□□ -1.43
CBX1P83916 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC6.11□□□□□ -1.43
CBX1P83916 RPL23AP60-201ENST00000450011 454 ntBASIC6.11□□□□□ -1.43
CBX1P83916 RNA5SP103-201ENST00000459503 118 ntBASIC6.11□□□□□ -1.43
CBX1P83916 AC008620.1-201ENST00000468453 592 ntBASIC6.11□□□□□ -1.43
CBX1P83916 RN7SL228P-201ENST00000470060 303 ntBASIC6.11□□□□□ -1.43
CBX1P83916 RPS26P6-201ENST00000475156 348 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms