Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC4.13□□□□□ -1.75
RPL39P62891 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
RPL39P62891 AC117503.3-201ENST00000623811 601 ntBASIC4.13□□□□□ -1.75
RPL39P62891 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC4.13□□□□□ -1.75
RPL39P62891 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.13□□□□□ -1.75
RPL39P62891 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.13□□□□□ -1.75
RPL39P62891 RPS2P45-201ENST00000469997 2057 ntBASIC4.13□□□□□ -1.75
RPL39P62891 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 AP004607.3-201ENST00000530354 3915 ntBASIC4.13□□□□□ -1.75
RPL39P62891 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 FBXL21-201ENST00000297158 1305 ntBASIC4.13□□□□□ -1.75
RPL39P62891 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.13□□□□□ -1.75
RPL39P62891 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.13□□□□□ -1.75
RPL39P62891 MAPK10-328ENST00000641553 4009 ntBASIC4.13□□□□□ -1.75
RPL39P62891 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RPL39P62891 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RPL39P62891 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPL39P62891 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RPL39P62891 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RPL39P62891 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RPL39P62891 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 MFSD8-239ENST00000641590 2479 ntBASIC4.12□□□□□ -1.75
RPL39P62891 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RPL39P62891 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.12□□□□□ -1.75
RPL39P62891 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RPL39P62891 AC092634.1-201ENST00000366505 199 ntBASIC4.12□□□□□ -1.75
RPL39P62891 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.12□□□□□ -1.75
RPL39P62891 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 RNA5SP91-201ENST00000390902 119 ntBASIC4.12□□□□□ -1.75
RPL39P62891 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 NPM1P37-201ENST00000403105 874 ntBASIC4.12□□□□□ -1.75
RPL39P62891 RN7SKP117-201ENST00000410175 264 ntBASIC4.12□□□□□ -1.75
RPL39P62891 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.12□□□□□ -1.75
RPL39P62891 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC4.12□□□□□ -1.75
RPL39P62891 MTND2P12-201ENST00000417560 1252 ntBASIC4.12□□□□□ -1.75
RPL39P62891 GPN3P1-201ENST00000423883 535 ntBASIC4.12□□□□□ -1.75
RPL39P62891 RPL7AP14-201ENST00000424041 802 ntBASIC4.12□□□□□ -1.75
RPL39P62891 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 AC099677.3-201ENST00000427081 395 ntBASIC4.12□□□□□ -1.75
RPL39P62891 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.12□□□□□ -1.75
RPL39P62891 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.12□□□□□ -1.75
RPL39P62891 AC094019.1-201ENST00000434678 472 ntBASIC4.12□□□□□ -1.75
RPL39P62891 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.12□□□□□ -1.75
RPL39P62891 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.12□□□□□ -1.75
RPL39P62891 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.12□□□□□ -1.75
RPL39P62891 BMS1P11-201ENST00000442351 885 ntBASIC4.12□□□□□ -1.75
RPL39P62891 OR2L9P-201ENST00000444456 913 ntBASIC4.12□□□□□ -1.75
RPL39P62891 BMS1P9-201ENST00000457640 885 ntBASIC4.12□□□□□ -1.75
RPL39P62891 RN7SL39P-201ENST00000462264 297 ntBASIC4.12□□□□□ -1.75
RPL39P62891 AC090602.1-201ENST00000469695 252 ntBASIC4.12□□□□□ -1.75
RPL39P62891 RN7SL655P-201ENST00000486087 298 ntBASIC4.12□□□□□ -1.75
RPL39P62891 RPL5P33-201ENST00000487833 905 ntBASIC4.12□□□□□ -1.75
RPL39P62891 AC083795.1-201ENST00000491760 320 ntBASIC4.12□□□□□ -1.75
RPL39P62891 RPSAP51-201ENST00000497462 645 ntBASIC4.12□□□□□ -1.75
RPL39P62891 RN7SL104P-201ENST00000498686 293 ntBASIC4.12□□□□□ -1.75
RPL39P62891 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.12□□□□□ -1.75
RPL39P62891 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC4.12□□□□□ -1.75
RPL39P62891 GAPDHP62-201ENST00000515313 990 ntBASIC4.12□□□□□ -1.75
RPL39P62891 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.12□□□□□ -1.75
RPL39P62891 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.12□□□□□ -1.75
RPL39P62891 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC4.12□□□□□ -1.75
RPL39P62891 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 CYCSP25-201ENST00000525280 316 ntBASIC4.12□□□□□ -1.75
RPL39P62891 AC130366.1-201ENST00000526505 1192 ntBASIC4.12□□□□□ -1.75
RPL39P62891 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.12□□□□□ -1.75
RPL39P62891 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.12□□□□□ -1.75
RPL39P62891 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.12□□□□□ -1.75
RPL39P62891 LDHC-204ENST00000536880 957 ntTSL 5 BASIC4.12□□□□□ -1.75
RPL39P62891 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RPL39P62891 AL121594.2-201ENST00000541658 472 ntBASIC4.12□□□□□ -1.75
RPL39P62891 CHEK2P2-201ENST00000554701 672 ntBASIC4.12□□□□□ -1.75
RPL39P62891 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.12□□□□□ -1.75
RPL39P62891 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.12□□□□□ -1.75
RPL39P62891 MIR8082-201ENST00000612488 81 ntBASIC4.12□□□□□ -1.75
RPL39P62891 MIR6133-201ENST00000617057 108 ntBASIC4.12□□□□□ -1.75
RPL39P62891 MIR6849-201ENST00000618543 69 ntBASIC4.12□□□□□ -1.75
RPL39P62891 MIR6811-201ENST00000620409 58 ntBASIC4.12□□□□□ -1.75
RPL39P62891 AC018558.4-201ENST00000622153 281 ntBASIC4.12□□□□□ -1.75
RPL39P62891 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.12□□□□□ -1.75
RPL39P62891 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
RPL39P62891 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
RPL39P62891 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RPL39P62891 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.12□□□□□ -1.75
RPL39P62891 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RPL39P62891 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 RBMY1HP-201ENST00000382759 1389 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms