Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC022400.9-201ENST00000623633 273 ntBASIC7.88□□□□□ -1.15
RIPK4P57078 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.88□□□□□ -1.15
RIPK4P57078 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
RIPK4P57078 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
RIPK4P57078 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RIPK4P57078 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.88□□□□□ -1.15
RIPK4P57078 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.88□□□□□ -1.15
RIPK4P57078 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RIPK4P57078 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
RIPK4P57078 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RIPK4P57078 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
RIPK4P57078 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.87□□□□□ -1.15
RIPK4P57078 AC005225.5-201ENST00000623547 2225 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RIPK4P57078 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
RIPK4P57078 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.87□□□□□ -1.15
RIPK4P57078 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RIPK4P57078 AC007114.2-201ENST00000576014 4281 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RIPK4P57078 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RIPK4P57078 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
RIPK4P57078 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RIPK4P57078 OR7E25P-201ENST00000344844 931 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 SNORA70H-201ENST00000383910 135 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 SNORA70J-201ENST00000384182 135 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.87□□□□□ -1.15
RIPK4P57078 AC015977.1-201ENST00000418887 292 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.87□□□□□ -1.15
RIPK4P57078 AC245884.2-201ENST00000426257 404 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 CDY8P-201ENST00000428380 1279 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.87□□□□□ -1.15
RIPK4P57078 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.87□□□□□ -1.15
RIPK4P57078 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.87□□□□□ -1.15
RIPK4P57078 CDY20P-201ENST00000447528 1279 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RIPK4P57078 AC144530.1-201ENST00000452862 555 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 GEMIN2P1-201ENST00000454246 752 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.87□□□□□ -1.15
RIPK4P57078 AC023245.1-201ENST00000468501 517 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 RPL12P24-201ENST00000474907 486 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 AC124945.1-201ENST00000485133 188 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.87□□□□□ -1.15
RIPK4P57078 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.87□□□□□ -1.15
RIPK4P57078 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.87□□□□□ -1.15
RIPK4P57078 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.87□□□□□ -1.15
RIPK4P57078 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.87□□□□□ -1.15
RIPK4P57078 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.87□□□□□ -1.15
RIPK4P57078 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.87□□□□□ -1.15
RIPK4P57078 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.87□□□□□ -1.15
RIPK4P57078 AC129778.1-202ENST00000623812 261 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 AL591379.1-207ENST00000635982 261 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.87□□□□□ -1.15
RIPK4P57078 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RIPK4P57078 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RIPK4P57078 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.87□□□□□ -1.15
RIPK4P57078 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
RIPK4P57078 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RIPK4P57078 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RIPK4P57078 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RIPK4P57078 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
RIPK4P57078 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.86□□□□□ -1.15
RIPK4P57078 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RIPK4P57078 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RIPK4P57078 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RIPK4P57078 SELENOWP1-201ENST00000322792 252 ntBASIC7.86□□□□□ -1.15
RIPK4P57078 RNA5SP514-201ENST00000363717 111 ntBASIC7.86□□□□□ -1.15
RIPK4P57078 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
RIPK4P57078 RN7SKP166-201ENST00000410812 305 ntBASIC7.86□□□□□ -1.15
RIPK4P57078 KIF4CP-201ENST00000422742 1279 ntBASIC7.86□□□□□ -1.15
RIPK4P57078 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RIPK4P57078 BMS1P10-201ENST00000443754 1120 ntBASIC7.86□□□□□ -1.15
RIPK4P57078 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.86□□□□□ -1.15
RIPK4P57078 PPP1R11P1-201ENST00000486095 376 ntBASIC7.86□□□□□ -1.15
RIPK4P57078 AC008629.2-201ENST00000503783 483 ntBASIC7.86□□□□□ -1.15
RIPK4P57078 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.86□□□□□ -1.15
RIPK4P57078 AC114781.3-201ENST00000512083 142 ntBASIC7.86□□□□□ -1.15
RIPK4P57078 SCARNA18.1-201ENST00000516330 83 ntBASIC7.86□□□□□ -1.15
RIPK4P57078 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC7.86□□□□□ -1.15
RIPK4P57078 AC060775.1-201ENST00000518241 520 ntBASIC7.86□□□□□ -1.15
RIPK4P57078 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RIPK4P57078 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.86□□□□□ -1.15
RIPK4P57078 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.86□□□□□ -1.15
RIPK4P57078 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.86□□□□□ -1.15
RIPK4P57078 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.86□□□□□ -1.15
RIPK4P57078 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.86□□□□□ -1.15
RIPK4P57078 MIR132-201ENST00000591554 101 ntBASIC7.86□□□□□ -1.15
RIPK4P57078 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.86□□□□□ -1.15
RIPK4P57078 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.86□□□□□ -1.15
RIPK4P57078 MIR6861-201ENST00000618657 64 ntBASIC7.86□□□□□ -1.15
RIPK4P57078 AC129915.3-201ENST00000634128 948 ntBASIC7.86□□□□□ -1.15
RIPK4P57078 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RIPK4P57078 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
RIPK4P57078 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
RIPK4P57078 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RIPK4P57078 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
RIPK4P57078 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RIPK4P57078 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.86□□□□□ -1.15
RIPK4P57078 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RIPK4P57078 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RIPK4P57078 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms