Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK1P53667 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK1P53667 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.3□□□□□ -1.4
LIMK1P53667 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.3□□□□□ -1.4
LIMK1P53667 AC130360.1-201ENST00000425489 1117 ntBASIC6.3□□□□□ -1.4
LIMK1P53667 RPL34P27-201ENST00000428810 349 ntBASIC6.3□□□□□ -1.4
LIMK1P53667 AC112492.2-201ENST00000432774 1030 ntBASIC6.3□□□□□ -1.4
LIMK1P53667 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.3□□□□□ -1.4
LIMK1P53667 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.3□□□□□ -1.4
LIMK1P53667 ASNSP4-201ENST00000511103 447 ntBASIC6.3□□□□□ -1.4
LIMK1P53667 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.3□□□□□ -1.4
LIMK1P53667 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.3□□□□□ -1.4
LIMK1P53667 IGKV2-18-201ENST00000522607 343 ntBASIC6.3□□□□□ -1.4
LIMK1P53667 AC130365.2-201ENST00000525882 1201 ntBASIC6.3□□□□□ -1.4
LIMK1P53667 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.3□□□□□ -1.4
LIMK1P53667 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.3□□□□□ -1.4
LIMK1P53667 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.3□□□□□ -1.4
LIMK1P53667 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.3□□□□□ -1.4
LIMK1P53667 AC106785.4-201ENST00000569492 412 ntBASIC6.3□□□□□ -1.4
LIMK1P53667 AC010547.7-201ENST00000570323 333 ntBASIC6.3□□□□□ -1.4
LIMK1P53667 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.3□□□□□ -1.4
LIMK1P53667 AC090236.2-201ENST00000587933 1101 ntBASIC6.3□□□□□ -1.4
LIMK1P53667 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.3□□□□□ -1.4
LIMK1P53667 AL049840.5-201ENST00000602827 552 ntBASIC6.3□□□□□ -1.4
LIMK1P53667 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.3□□□□□ -1.4
LIMK1P53667 AC004948.1-201ENST00000609858 672 ntBASIC6.3□□□□□ -1.4
LIMK1P53667 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
LIMK1P53667 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.3□□□□□ -1.4
LIMK1P53667 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.3□□□□□ -1.4
LIMK1P53667 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
LIMK1P53667 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.3□□□□□ -1.4
LIMK1P53667 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
LIMK1P53667 AC092111.2-201ENST00000611627 1414 ntBASIC6.3□□□□□ -1.4
LIMK1P53667 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK1P53667 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK1P53667 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK1P53667 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK1P53667 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK1P53667 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK1P53667 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK1P53667 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK1P53667 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK1P53667 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK1P53667 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
LIMK1P53667 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK1P53667 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.3□□□□□ -1.4
LIMK1P53667 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK1P53667 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.29□□□□□ -1.4
LIMK1P53667 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK1P53667 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK1P53667 AP005139.1-201ENST00000580702 1647 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 AL591848.4-201ENST00000567832 3472 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 CDC27P2-201ENST00000425026 1922 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK1P53667 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.29□□□□□ -1.4
LIMK1P53667 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK1P53667 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK1P53667 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.29□□□□□ -1.4
LIMK1P53667 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
LIMK1P53667 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
LIMK1P53667 RNA5SP273-201ENST00000362484 113 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 RNA5SP514-201ENST00000363717 111 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 RN7SKP186-201ENST00000365371 303 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
LIMK1P53667 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.29□□□□□ -1.4
LIMK1P53667 AL513325.1-201ENST00000417716 1034 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.29□□□□□ -1.4
LIMK1P53667 MED28P4-201ENST00000433137 572 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.29□□□□□ -1.4
LIMK1P53667 SOCS5P1-201ENST00000440415 949 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK1P53667 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.29□□□□□ -1.4
LIMK1P53667 CST12P-201ENST00000457644 362 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.29□□□□□ -1.4
LIMK1P53667 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 AC091917.2-201ENST00000505002 744 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.29□□□□□ -1.4
LIMK1P53667 RN7SKP238-201ENST00000516483 249 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 IGLV2-28-201ENST00000520681 304 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.29□□□□□ -1.4
LIMK1P53667 IGHV4-55-201ENST00000520889 368 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 AP006245.2-201ENST00000522004 300 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 KCTD9P6-201ENST00000522306 950 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.29□□□□□ -1.4
LIMK1P53667 KCTD9P4-201ENST00000526766 1166 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.29□□□□□ -1.4
LIMK1P53667 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK1P53667 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.29□□□□□ -1.4
LIMK1P53667 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.29□□□□□ -1.4
LIMK1P53667 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.29□□□□□ -1.4
LIMK1P53667 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.29□□□□□ -1.4
LIMK1P53667 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK1P53667 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK1P53667 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK1P53667 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
LIMK1P53667 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
LIMK1P53667 AL731556.1-201ENST00000394628 3711 ntBASIC6.29□□□□□ -1.4
LIMK1P53667 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
LIMK1P53667 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms