Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HCFC1P51610 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.32□□□□□ -1.56
HCFC1P51610 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
HCFC1P51610 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.32□□□□□ -1.56
HCFC1P51610 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.32□□□□□ -1.56
HCFC1P51610 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HCFC1P51610 AL445238.1-204ENST00000400311 463 ntBASIC5.32□□□□□ -1.56
HCFC1P51610 AC093155.2-201ENST00000420734 937 ntBASIC5.32□□□□□ -1.56
HCFC1P51610 KIF4CP-201ENST00000422742 1279 ntBASIC5.32□□□□□ -1.56
HCFC1P51610 AC073909.1-201ENST00000447112 999 ntBASIC5.32□□□□□ -1.56
HCFC1P51610 VN1R38P-201ENST00000450265 887 ntBASIC5.32□□□□□ -1.56
HCFC1P51610 AC016027.4-201ENST00000450866 277 ntBASIC5.32□□□□□ -1.56
HCFC1P51610 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.32□□□□□ -1.56
HCFC1P51610 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.32□□□□□ -1.56
HCFC1P51610 OR4H6P-201ENST00000563771 921 ntBASIC5.32□□□□□ -1.56
HCFC1P51610 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.32□□□□□ -1.56
HCFC1P51610 AC245014.3-201ENST00000618589 347 ntBASIC5.32□□□□□ -1.56
HCFC1P51610 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HCFC1P51610 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.32□□□□□ -1.56
HCFC1P51610 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.32□□□□□ -1.56
HCFC1P51610 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.32□□□□□ -1.56
HCFC1P51610 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HCFC1P51610 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HCFC1P51610 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HCFC1P51610 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HCFC1P51610 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.31□□□□□ -1.56
HCFC1P51610 SNORA64.1-201ENST00000362600 132 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 U3.7-201ENST00000363668 216 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 AL451142.1-201ENST00000375867 775 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.31□□□□□ -1.56
HCFC1P51610 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.31□□□□□ -1.56
HCFC1P51610 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.31□□□□□ -1.56
HCFC1P51610 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.31□□□□□ -1.56
HCFC1P51610 AL139156.3-201ENST00000454802 394 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 IGHV1-14-201ENST00000523391 241 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.31□□□□□ -1.56
HCFC1P51610 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.31□□□□□ -1.56
HCFC1P51610 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.31□□□□□ -1.56
HCFC1P51610 AC006530.1-201ENST00000555980 571 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 RN7SL544P-201ENST00000617232 284 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 RN7SL763P-201ENST00000620922 284 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
HCFC1P51610 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.31□□□□□ -1.56
HCFC1P51610 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
HCFC1P51610 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.31□□□□□ -1.56
HCFC1P51610 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 RNA5SP234-201ENST00000363916 119 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 RNU105B-201ENST00000364478 208 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 RN7SKP124-201ENST00000364730 341 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 AL132875.1-201ENST00000403623 949 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.31□□□□□ -1.56
HCFC1P51610 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.31□□□□□ -1.56
HCFC1P51610 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.31□□□□□ -1.56
HCFC1P51610 GAPDHP71-201ENST00000511530 1003 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.31□□□□□ -1.56
HCFC1P51610 AC110056.1-201ENST00000525759 911 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HCFC1P51610 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.31□□□□□ -1.56
HCFC1P51610 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.31□□□□□ -1.56
HCFC1P51610 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.31□□□□□ -1.56
HCFC1P51610 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.31□□□□□ -1.56
HCFC1P51610 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.31□□□□□ -1.56
HCFC1P51610 AC008536.1-201ENST00000602872 669 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 SUMO2P15-201ENST00000604285 278 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 AL357562.1-201ENST00000624911 609 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 CFTRP2-201ENST00000634304 199 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 AC123769.1-201ENST00000530992 3192 ntBASIC5.31□□□□□ -1.56
HCFC1P51610 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HCFC1P51610 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HCFC1P51610 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
HCFC1P51610 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HCFC1P51610 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
HCFC1P51610 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HCFC1P51610 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HCFC1P51610 AL161901.1-201ENST00000624954 3425 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HCFC1P51610 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HCFC1P51610 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HCFC1P51610 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.3□□□□□ -1.56
HCFC1P51610 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC5.3□□□□□ -1.56
HCFC1P51610 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
HCFC1P51610 AL731556.1-201ENST00000394628 3711 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HCFC1P51610 OR2M1P-201ENST00000318104 951 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms