Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ZFAND6P1-201ENST00000434138 605 ntBASIC7.5□□□□□ -1.21
MRE11P49959 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.5□□□□□ -1.21
MRE11P49959 ZNF736P6Y-201ENST00000447526 1213 ntBASIC7.5□□□□□ -1.21
MRE11P49959 AC103563.5-201ENST00000455643 364 ntBASIC7.5□□□□□ -1.21
MRE11P49959 AC110749.1-201ENST00000462007 357 ntBASIC7.5□□□□□ -1.21
MRE11P49959 RN7SL379P-201ENST00000479912 293 ntBASIC7.5□□□□□ -1.21
MRE11P49959 AC106822.1-201ENST00000502647 526 ntBASIC7.5□□□□□ -1.21
MRE11P49959 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.5□□□□□ -1.21
MRE11P49959 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.5□□□□□ -1.21
MRE11P49959 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
MRE11P49959 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
MRE11P49959 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.5□□□□□ -1.21
MRE11P49959 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.5□□□□□ -1.21
MRE11P49959 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.5□□□□□ -1.21
MRE11P49959 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.5□□□□□ -1.21
MRE11P49959 NPM1P5-201ENST00000557228 838 ntBASIC7.5□□□□□ -1.21
MRE11P49959 AC090651.1-201ENST00000567865 634 ntBASIC7.5□□□□□ -1.21
MRE11P49959 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.5□□□□□ -1.21
MRE11P49959 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.5□□□□□ -1.21
MRE11P49959 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.5□□□□□ -1.21
MRE11P49959 GMCL1P2-201ENST00000605230 823 ntBASIC7.5□□□□□ -1.21
MRE11P49959 AC015802.5-201ENST00000607478 399 ntBASIC7.5□□□□□ -1.21
MRE11P49959 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC7.5□□□□□ -1.21
MRE11P49959 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC7.5□□□□□ -1.21
MRE11P49959 AC025262.3-201ENST00000623666 360 ntBASIC7.5□□□□□ -1.21
MRE11P49959 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.5□□□□□ -1.21
MRE11P49959 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
MRE11P49959 AL451064.2-201ENST00000623514 1654 ntBASIC7.5□□□□□ -1.21
MRE11P49959 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
MRE11P49959 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.5□□□□□ -1.21
MRE11P49959 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
MRE11P49959 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.5□□□□□ -1.21
MRE11P49959 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.5□□□□□ -1.21
MRE11P49959 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.5□□□□□ -1.21
MRE11P49959 AC078880.4-201ENST00000617627 1749 ntBASIC7.49□□□□□ -1.21
MRE11P49959 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
MRE11P49959 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.49□□□□□ -1.21
MRE11P49959 HSPA8P19-201ENST00000505359 1517 ntBASIC7.49□□□□□ -1.21
MRE11P49959 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
MRE11P49959 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
MRE11P49959 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.49□□□□□ -1.21
MRE11P49959 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
MRE11P49959 MIR152-201ENST00000385212 87 ntBASIC7.49□□□□□ -1.21
MRE11P49959 MIR937-201ENST00000401271 86 ntBASIC7.49□□□□□ -1.21
MRE11P49959 ATP5F1P6-201ENST00000402768 767 ntBASIC7.49□□□□□ -1.21
MRE11P49959 RN7SKP268-201ENST00000411107 316 ntBASIC7.49□□□□□ -1.21
MRE11P49959 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 MTCO2P17-201ENST00000424336 677 ntBASIC7.49□□□□□ -1.21
MRE11P49959 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7.49□□□□□ -1.21
MRE11P49959 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC7.49□□□□□ -1.21
MRE11P49959 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.49□□□□□ -1.21
MRE11P49959 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC7.49□□□□□ -1.21
MRE11P49959 Z68868.1-201ENST00000429048 544 ntBASIC7.49□□□□□ -1.21
MRE11P49959 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC7.49□□□□□ -1.21
MRE11P49959 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 AC009237.4-201ENST00000441078 238 ntBASIC7.49□□□□□ -1.21
MRE11P49959 OFD1P3Y-201ENST00000453312 783 ntBASIC7.49□□□□□ -1.21
MRE11P49959 FCF1P6-201ENST00000456841 595 ntBASIC7.49□□□□□ -1.21
MRE11P49959 NMNAT1P3-201ENST00000457517 888 ntBASIC7.49□□□□□ -1.21
MRE11P49959 AL445687.2-201ENST00000458156 728 ntBASIC7.49□□□□□ -1.21
MRE11P49959 PABPC1P10-201ENST00000464731 381 ntBASIC7.49□□□□□ -1.21
MRE11P49959 MYL6P4-201ENST00000477911 453 ntBASIC7.49□□□□□ -1.21
MRE11P49959 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC7.49□□□□□ -1.21
MRE11P49959 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC7.49□□□□□ -1.21
MRE11P49959 SNORD116-30-201ENST00000516468 85 ntBASIC7.49□□□□□ -1.21
MRE11P49959 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC7.49□□□□□ -1.21
MRE11P49959 AC138701.1-201ENST00000524329 714 ntBASIC7.49□□□□□ -1.21
MRE11P49959 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.49□□□□□ -1.21
MRE11P49959 AC007537.1-201ENST00000539347 327 ntBASIC7.49□□□□□ -1.21
MRE11P49959 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.49□□□□□ -1.21
MRE11P49959 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.49□□□□□ -1.21
MRE11P49959 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC7.49□□□□□ -1.21
MRE11P49959 AC233702.7-202ENST00000582941 211 ntBASIC7.49□□□□□ -1.21
MRE11P49959 AL451064.1-201ENST00000607718 471 ntBASIC7.49□□□□□ -1.21
MRE11P49959 AL365181.4-201ENST00000609800 547 ntBASIC7.49□□□□□ -1.21
MRE11P49959 AC097478.2-201ENST00000610572 514 ntBASIC7.49□□□□□ -1.21
MRE11P49959 AC024255.1-201ENST00000614376 102 ntBASIC7.49□□□□□ -1.21
MRE11P49959 AC016769.4-201ENST00000616893 535 ntBASIC7.49□□□□□ -1.21
MRE11P49959 AC211433.3-201ENST00000623770 375 ntBASIC7.49□□□□□ -1.21
MRE11P49959 AC000095.2-202ENST00000637415 154 ntBASIC7.49□□□□□ -1.21
MRE11P49959 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
MRE11P49959 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
MRE11P49959 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MRE11P49959 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.49□□□□□ -1.21
MRE11P49959 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.49□□□□□ -1.21
MRE11P49959 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms