Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 DLEU1-212ENST00000469754 2955 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 AC122688.4-201ENST00000623279 4394 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.57□□□□□ -1.04
COL9A1P20849 SCYL3-203ENST00000367772 3090 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
COL9A1P20849 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC8.57□□□□□ -1.04
COL9A1P20849 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 RNU6-543P-201ENST00000362576 108 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 PSMA6P1-201ENST00000400275 741 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 AL136981.1-201ENST00000411450 549 ntTSL 4 BASIC8.57□□□□□ -1.04
COL9A1P20849 AC114482.1-201ENST00000418010 247 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 PGAM1P3-201ENST00000420790 565 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 PPIL1P1-201ENST00000423936 499 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 SNX18P3-201ENST00000424993 835 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 RPL5P34-201ENST00000426545 891 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC8.57□□□□□ -1.04
COL9A1P20849 MTAPP2-201ENST00000437063 832 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 SKP1P1-201ENST00000438081 489 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 AC108039.2-201ENST00000440214 359 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 ERVMER34-1-202ENST00000443173 3830 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
COL9A1P20849 RPL5P12-201ENST00000477071 851 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 SNRPCP11-201ENST00000492453 205 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC8.57□□□□□ -1.04
COL9A1P20849 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC8.57□□□□□ -1.04
COL9A1P20849 RN7SKP14-201ENST00000516000 329 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 RN7SKP40-201ENST00000517211 242 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 AP003467.2-201ENST00000520175 319 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC8.57□□□□□ -1.04
COL9A1P20849 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC8.57□□□□□ -1.04
COL9A1P20849 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC8.57□□□□□ -1.04
COL9A1P20849 MIR4307-201ENST00000582802 84 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC8.57□□□□□ -1.04
COL9A1P20849 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.57□□□□□ -1.04
COL9A1P20849 AC115286.1-201ENST00000604298 434 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 AL080274.1-201ENST00000605565 220 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
COL9A1P20849 AC040168.1-201ENST00000623594 991 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 RPL36AP21-202ENST00000639134 430 ntBASIC8.57□□□□□ -1.04
COL9A1P20849 SEC16B-204ENST00000464631 2948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 GRIA1-208ENST00000518142 2761 ntTSL 2 BASIC8.57□□□□□ -1.04
COL9A1P20849 AP002748.4-201ENST00000419755 3547 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
COL9A1P20849 FZD6-201ENST00000358755 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 TOX4-203ENST00000448790 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 KCNJ15-207ENST00000398934 2815 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
COL9A1P20849 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
COL9A1P20849 ASXL2-202ENST00000404843 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
COL9A1P20849 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
COL9A1P20849 FAM19A1-203ENST00000496687 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
COL9A1P20849 GALC-203ENST00000393569 2547 ntTSL 2 BASIC8.56□□□□□ -1.04
COL9A1P20849 AC008966.1-203ENST00000499459 3137 ntTSL 2 BASIC8.56□□□□□ -1.04
COL9A1P20849 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
COL9A1P20849 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
COL9A1P20849 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
COL9A1P20849 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
COL9A1P20849 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC8.56□□□□□ -1.04
COL9A1P20849 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
COL9A1P20849 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
COL9A1P20849 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
COL9A1P20849 CLUAP1-212ENST00000576634 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
COL9A1P20849 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.56□□□□□ -1.04
COL9A1P20849 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
COL9A1P20849 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
COL9A1P20849 SNORA22B-201ENST00000383876 138 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 RNU6-533P-201ENST00000384144 107 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 RNU4-31P-201ENST00000384211 141 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 RNU6-74P-201ENST00000384235 107 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 RPL23AP29-201ENST00000397284 453 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 MIR1282-201ENST00000408865 101 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 Z82198.3-201ENST00000421145 199 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 AL645937.1-202ENST00000421799 937 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 NANOGP6-201ENST00000429190 847 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 AC007683.1-201ENST00000432746 591 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC8.56□□□□□ -1.04
COL9A1P20849 CALM1P2-201ENST00000452941 448 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 MTND1P12-201ENST00000455231 147 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 TFP1-201ENST00000460564 572 ntTSL 4 BASIC8.56□□□□□ -1.04
COL9A1P20849 AC083798.1-201ENST00000472671 131 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 RPL7P39-201ENST00000481157 744 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.56□□□□□ -1.04
COL9A1P20849 TFP1-203ENST00000490470 561 ntTSL 4 BASIC8.56□□□□□ -1.04
COL9A1P20849 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.56□□□□□ -1.04
COL9A1P20849 RN7SKP183-201ENST00000517169 324 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 IGLV10-67-201ENST00000519446 325 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC8.56□□□□□ -1.04
COL9A1P20849 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC8.56□□□□□ -1.04
COL9A1P20849 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.56□□□□□ -1.04
COL9A1P20849 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC8.56□□□□□ -1.04
COL9A1P20849 ARL6IP1P1-201ENST00000545836 610 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC8.56□□□□□ -1.04
COL9A1P20849 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC8.56□□□□□ -1.04
COL9A1P20849 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC8.56□□□□□ -1.04
COL9A1P20849 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC8.56□□□□□ -1.04
COL9A1P20849 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC8.56□□□□□ -1.04
COL9A1P20849 AL589863.1-201ENST00000595383 631 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 AC009597.2-201ENST00000604659 592 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC8.56□□□□□ -1.04
COL9A1P20849 AP004607.9-201ENST00000618202 316 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms