Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL590004.3-202ENST00000445883 451 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AC073072.2-201ENST00000447425 348 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 EEF1B2P3-201ENST00000447718 678 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 OR52Y1P-201ENST00000452418 828 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 RAB28P2-201ENST00000454299 641 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AC016687.1-201ENST00000482574 353 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 RN7SL362P-201ENST00000494228 267 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 RFPL4AP3-201ENST00000515267 345 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 RNA5SP116-201ENST00000516132 98 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AL078601.3-201ENST00000573303 535 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AC115989.2-201ENST00000578640 563 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AP005136.2-201ENST00000583253 1049 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AL135999.3-201ENST00000610501 812 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AC022106.1-201ENST00000612834 766 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AL162377.2-201ENST00000624532 337 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AC034229.2-201ENST00000566945 2508 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 HSPD1P8-201ENST00000400121 1658 ntBASIC6.2□□□□□ -1.42
HLA-DPA1P20036 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 RNF19BPY-201ENST00000458209 1550 ntBASIC6.2□□□□□ -1.42
HLA-DPA1P20036 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 AL451046.1-201ENST00000406097 534 ntBASIC6.2□□□□□ -1.42
HLA-DPA1P20036 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 RPS7P8-201ENST00000418311 581 ntBASIC6.2□□□□□ -1.42
HLA-DPA1P20036 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 RPL23AP60-201ENST00000450011 454 ntBASIC6.2□□□□□ -1.42
HLA-DPA1P20036 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 RPL12P30-201ENST00000488389 499 ntBASIC6.2□□□□□ -1.42
HLA-DPA1P20036 RNA5SP434-201ENST00000516647 121 ntBASIC6.2□□□□□ -1.42
HLA-DPA1P20036 RNA5SP441-201ENST00000516809 88 ntBASIC6.2□□□□□ -1.42
HLA-DPA1P20036 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 AP001804.1-201ENST00000526868 919 ntBASIC6.2□□□□□ -1.42
HLA-DPA1P20036 AC025423.2-201ENST00000537570 439 ntBASIC6.2□□□□□ -1.42
HLA-DPA1P20036 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 AC141002.1-201ENST00000607025 279 ntBASIC6.2□□□□□ -1.42
HLA-DPA1P20036 OR8G7P-201ENST00000616658 848 ntBASIC6.2□□□□□ -1.42
HLA-DPA1P20036 MIR6806-201ENST00000622141 64 ntBASIC6.2□□□□□ -1.42
HLA-DPA1P20036 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 MSL3P1-202ENST00000440028 1468 ntBASIC6.2□□□□□ -1.42
HLA-DPA1P20036 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DPA1P20036 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 RNA5SP156-201ENST00000410250 110 ntBASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AC015977.1-201ENST00000418887 292 ntBASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AL034379.1-201ENST00000423216 253 ntBASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AC092865.3-201ENST00000425390 1026 ntBASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AL354707.3-201ENST00000427308 331 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms