Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC090424.1-201ENST00000535243 736 ntBASIC10.15□□□□□ -0.78
TOP2AP11388 AL049779.3-201ENST00000557141 606 ntBASIC10.15□□□□□ -0.78
TOP2AP11388 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC10.15□□□□□ -0.78
TOP2AP11388 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC10.15□□□□□ -0.78
TOP2AP11388 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC10.15□□□□□ -0.78
TOP2AP11388 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
TOP2AP11388 USP9YP3-201ENST00000434481 1766 ntBASIC10.15□□□□□ -0.78
TOP2AP11388 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC10.15□□□□□ -0.78
TOP2AP11388 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
TOP2AP11388 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
TOP2AP11388 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
TOP2AP11388 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.79
TOP2AP11388 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC10.15□□□□□ -0.79
TOP2AP11388 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC10.14□□□□□ -0.79
TOP2AP11388 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
TOP2AP11388 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
TOP2AP11388 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
TOP2AP11388 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
TOP2AP11388 RNA5SP514-201ENST00000363717 111 ntBASIC10.14□□□□□ -0.79
TOP2AP11388 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC10.14□□□□□ -0.79
TOP2AP11388 AURKAPS1-201ENST00000451805 1212 ntBASIC10.14□□□□□ -0.79
TOP2AP11388 AL606490.1-201ENST00000452266 765 ntBASIC10.14□□□□□ -0.79
TOP2AP11388 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC10.14□□□□□ -0.79
TOP2AP11388 MIR6798-201ENST00000612887 67 ntBASIC10.14□□□□□ -0.79
TOP2AP11388 MAPK10-365ENST00000641902 3825 ntBASIC10.14□□□□□ -0.79
TOP2AP11388 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
TOP2AP11388 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
TOP2AP11388 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
TOP2AP11388 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
TOP2AP11388 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
TOP2AP11388 AC009804.1-201ENST00000400949 179 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 NIFKP3-201ENST00000417799 865 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 OR52B5P-201ENST00000435337 951 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC10.13□□□□□ -0.79
TOP2AP11388 AP000547.1-201ENST00000454360 617 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 AL035090.1-201ENST00000454835 332 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 RPL7L1P3-201ENST00000455249 689 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 LDHBP2-201ENST00000456969 1005 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 ACA64.4-201ENST00000459070 127 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 RN7SL352P-201ENST00000466002 277 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 RPS4XP1-201ENST00000482189 787 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC10.13□□□□□ -0.79
TOP2AP11388 AC021678.3-201ENST00000517893 476 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 CDC42P3-201ENST00000518493 633 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC10.13□□□□□ -0.79
TOP2AP11388 OR8G3P-201ENST00000533406 921 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 HMGN2P6-201ENST00000551091 273 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 AC091193.1-201ENST00000604640 448 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 MIR6837-201ENST00000620884 64 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 OR52B5P-202ENST00000641118 1110 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TOP2AP11388 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
TOP2AP11388 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
TOP2AP11388 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC10.13□□□□□ -0.79
TOP2AP11388 EEF1A1P30-201ENST00000429708 1315 ntBASIC10.13□□□□□ -0.79
TOP2AP11388 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
TOP2AP11388 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TOP2AP11388 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TOP2AP11388 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TOP2AP11388 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
TOP2AP11388 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
TOP2AP11388 RN7SKP28-201ENST00000364770 305 ntBASIC10.12□□□□□ -0.79
TOP2AP11388 RNU1-106P-201ENST00000384382 164 ntBASIC10.12□□□□□ -0.79
TOP2AP11388 RN7SKP125-201ENST00000410481 302 ntBASIC10.12□□□□□ -0.79
TOP2AP11388 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC10.12□□□□□ -0.79
TOP2AP11388 CYCSP6-201ENST00000434498 302 ntBASIC10.12□□□□□ -0.79
TOP2AP11388 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC10.12□□□□□ -0.79
TOP2AP11388 OR2AO1P-201ENST00000476497 403 ntBASIC10.12□□□□□ -0.79
TOP2AP11388 RN7SL30P-201ENST00000488416 306 ntBASIC10.12□□□□□ -0.79
TOP2AP11388 RN7SL808P-201ENST00000496066 299 ntBASIC10.12□□□□□ -0.79
TOP2AP11388 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
TOP2AP11388 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC10.12□□□□□ -0.79
TOP2AP11388 MRPS21P7-201ENST00000566937 238 ntBASIC10.12□□□□□ -0.79
TOP2AP11388 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC10.12□□□□□ -0.79
TOP2AP11388 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC10.12□□□□□ -0.79
TOP2AP11388 AC116651.1-201ENST00000609724 556 ntBASIC10.12□□□□□ -0.79
TOP2AP11388 CASC22-202ENST00000628396 802 ntTSL 5 BASIC10.12□□□□□ -0.79
TOP2AP11388 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
TOP2AP11388 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TOP2AP11388 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
TOP2AP11388 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC10.12□□□□□ -0.79
TOP2AP11388 IMMTP1-201ENST00000435590 2219 ntBASIC10.12□□□□□ -0.79
TOP2AP11388 AC008957.3-201ENST00000624112 2242 ntBASIC10.12□□□□□ -0.79
TOP2AP11388 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TOP2AP11388 AC092821.2-201ENST00000545710 2042 ntBASIC10.12□□□□□ -0.79
TOP2AP11388 AL161912.4-201ENST00000623889 2468 ntBASIC10.12□□□□□ -0.79
TOP2AP11388 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
TOP2AP11388 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TOP2AP11388 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC10.12□□□□□ -0.79
TOP2AP11388 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC10.12□□□□□ -0.79
TOP2AP11388 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
TOP2AP11388 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC10.12□□□□□ -0.79
TOP2AP11388 AL450996.1-201ENST00000445574 1202 ntBASIC10.12□□□□□ -0.79
TOP2AP11388 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC10.12□□□□□ -0.79
TOP2AP11388 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC10.12□□□□□ -0.79
TOP2AP11388 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC10.12□□□□□ -0.79
TOP2AP11388 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC10.12□□□□□ -0.79
TOP2AP11388 TMEM75-201ENST00000624314 2165 ntBASIC10.12□□□□□ -0.79
TOP2AP11388 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
TOP2AP11388 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms