Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CD48P09326 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
CD48P09326 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CD48P09326 AC140134.1-201ENST00000511830 3544 ntBASIC6.21□□□□□ -1.42
CD48P09326 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CD48P09326 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CD48P09326 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CD48P09326 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CD48P09326 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.21□□□□□ -1.42
CD48P09326 RN7SKP86-201ENST00000410454 332 ntBASIC6.21□□□□□ -1.42
CD48P09326 AC245096.1-201ENST00000413104 546 ntBASIC6.21□□□□□ -1.42
CD48P09326 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.21□□□□□ -1.42
CD48P09326 RPL12P12-201ENST00000424633 501 ntBASIC6.21□□□□□ -1.42
CD48P09326 AC096632.2-201ENST00000438139 1239 ntBASIC6.21□□□□□ -1.42
CD48P09326 AL158068.1-201ENST00000506116 616 ntBASIC6.21□□□□□ -1.42
CD48P09326 AC108103.1-201ENST00000511286 446 ntBASIC6.21□□□□□ -1.42
CD48P09326 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.21□□□□□ -1.42
CD48P09326 OR56A7P-201ENST00000524865 941 ntBASIC6.21□□□□□ -1.42
CD48P09326 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.21□□□□□ -1.42
CD48P09326 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.21□□□□□ -1.42
CD48P09326 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.21□□□□□ -1.42
CD48P09326 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.21□□□□□ -1.42
CD48P09326 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.21□□□□□ -1.42
CD48P09326 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC6.21□□□□□ -1.42
CD48P09326 AC083837.1-201ENST00000565297 2994 ntBASIC6.21□□□□□ -1.42
CD48P09326 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CD48P09326 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.21□□□□□ -1.42
CD48P09326 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.21□□□□□ -1.42
CD48P09326 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
CD48P09326 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.21□□□□□ -1.42
CD48P09326 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.21□□□□□ -1.42
CD48P09326 AC073488.3-201ENST00000631611 778 ntBASIC6.21□□□□□ -1.42
CD48P09326 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.21□□□□□ -1.42
CD48P09326 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CD48P09326 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CD48P09326 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CD48P09326 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CD48P09326 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.21□□□□□ -1.42
CD48P09326 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CD48P09326 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CD48P09326 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
CD48P09326 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.2□□□□□ -1.42
CD48P09326 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.2□□□□□ -1.42
CD48P09326 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD48P09326 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD48P09326 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CD48P09326 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.2□□□□□ -1.42
CD48P09326 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD48P09326 AC008627.1-201ENST00000517511 1704 ntBASIC6.2□□□□□ -1.42
CD48P09326 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD48P09326 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD48P09326 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CD48P09326 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.2□□□□□ -1.42
CD48P09326 AC130304.1-201ENST00000622942 2385 ntBASIC6.2□□□□□ -1.42
CD48P09326 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD48P09326 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD48P09326 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD48P09326 RNA5SP232-201ENST00000364144 119 ntBASIC6.2□□□□□ -1.42
CD48P09326 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CD48P09326 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD48P09326 RBBP4P5-201ENST00000398583 1266 ntBASIC6.2□□□□□ -1.42
CD48P09326 AL121977.1-201ENST00000401636 979 ntBASIC6.2□□□□□ -1.42
CD48P09326 AL096711.1-201ENST00000404780 554 ntBASIC6.2□□□□□ -1.42
CD48P09326 SNRPEP6-201ENST00000407465 277 ntBASIC6.2□□□□□ -1.42
CD48P09326 MYL6P5-201ENST00000412707 459 ntBASIC6.2□□□□□ -1.42
CD48P09326 AL359885.1-201ENST00000415786 903 ntBASIC6.2□□□□□ -1.42
CD48P09326 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.2□□□□□ -1.42
CD48P09326 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.2□□□□□ -1.42
CD48P09326 RPS12P17-201ENST00000438591 377 ntBASIC6.2□□□□□ -1.42
CD48P09326 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.2□□□□□ -1.42
CD48P09326 HMGB1P7-201ENST00000450921 612 ntBASIC6.2□□□□□ -1.42
CD48P09326 AC104164.1-201ENST00000460282 590 ntBASIC6.2□□□□□ -1.42
CD48P09326 RN7SL254P-201ENST00000460609 284 ntBASIC6.2□□□□□ -1.42
CD48P09326 AC104339.1-201ENST00000465478 348 ntBASIC6.2□□□□□ -1.42
CD48P09326 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.2□□□□□ -1.42
CD48P09326 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC6.2□□□□□ -1.42
CD48P09326 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.2□□□□□ -1.42
CD48P09326 IGKV3D-25-201ENST00000519599 235 ntBASIC6.2□□□□□ -1.42
CD48P09326 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.2□□□□□ -1.42
CD48P09326 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.2□□□□□ -1.42
CD48P09326 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.2□□□□□ -1.42
CD48P09326 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CD48P09326 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.2□□□□□ -1.42
CD48P09326 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.2□□□□□ -1.42
CD48P09326 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.2□□□□□ -1.42
CD48P09326 AC124916.2-201ENST00000604416 224 ntBASIC6.2□□□□□ -1.42
CD48P09326 AC073389.3-201ENST00000609434 935 ntBASIC6.2□□□□□ -1.42
CD48P09326 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.2□□□□□ -1.42
CD48P09326 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.2□□□□□ -1.42
CD48P09326 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CD48P09326 AC232271.1-201ENST00000602455 2715 ntBASIC6.2□□□□□ -1.42
CD48P09326 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.2□□□□□ -1.42
CD48P09326 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
CD48P09326 AC015799.1-201ENST00000622996 3122 ntBASIC6.2□□□□□ -1.42
CD48P09326 AC025470.1-201ENST00000510053 2032 ntBASIC6.2□□□□□ -1.42
CD48P09326 MTCO1P28-201ENST00000574177 1528 ntBASIC6.2□□□□□ -1.42
CD48P09326 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CD48P09326 AC090181.3-201ENST00000624777 1514 ntBASIC6.2□□□□□ -1.42
CD48P09326 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
CD48P09326 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms