Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 AC073365.1-203ENST00000641055 1992 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 GNG5P2-201ENST00000372054 207 ntBASIC6.03□□□□□ -1.44
HLA-DQB2P05538 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 AC099535.1-201ENST00000408928 371 ntBASIC6.03□□□□□ -1.44
HLA-DQB2P05538 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 GEMIN2P1-201ENST00000454246 752 ntBASIC6.03□□□□□ -1.44
HLA-DQB2P05538 AL603882.1-201ENST00000463059 681 ntBASIC6.03□□□□□ -1.44
HLA-DQB2P05538 RN7SL168P-201ENST00000463821 279 ntBASIC6.03□□□□□ -1.44
HLA-DQB2P05538 PFN1P6-201ENST00000476786 399 ntBASIC6.03□□□□□ -1.44
HLA-DQB2P05538 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 RN7SL649P-201ENST00000496974 275 ntBASIC6.03□□□□□ -1.44
HLA-DQB2P05538 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 AC079905.1-201ENST00000549280 475 ntBASIC6.03□□□□□ -1.44
HLA-DQB2P05538 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 TXNP4-201ENST00000575018 310 ntBASIC6.03□□□□□ -1.44
HLA-DQB2P05538 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 AC005244.1-201ENST00000582566 339 ntBASIC6.03□□□□□ -1.44
HLA-DQB2P05538 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 AC245014.3-201ENST00000618589 347 ntBASIC6.03□□□□□ -1.44
HLA-DQB2P05538 SNX18P12-201ENST00000624821 759 ntBASIC6.03□□□□□ -1.44
HLA-DQB2P05538 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DQB2P05538 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AF287957.1-201ENST00000607368 1595 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 CASC19-238ENST00000641523 1558 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 RPS4XP5-201ENST00000419038 768 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AC092651.1-201ENST00000426110 312 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AC069154.1-201ENST00000432914 542 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 USP24P1-201ENST00000433802 779 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 CFL1P4-201ENST00000451536 498 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 LSM3P4-201ENST00000502948 309 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 BCAS2P1-201ENST00000528022 632 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 OR4A6P-201ENST00000534364 970 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AC103968.1-201ENST00000557841 573 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 GARSP1-201ENST00000570895 719 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AC090236.2-201ENST00000587933 1101 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 MAPK10-350ENST00000641777 965 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AC010329.1-201ENST00000593903 8328 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 OR2AH1P-202ENST00000641232 2744 ntBASIC6.02□□□□□ -1.45
HLA-DQB2P05538 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DQB2P05538 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms