Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
HMGN1P05114 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGN1P05114 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGN1P05114 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGN1P05114 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGN1P05114 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGN1P05114 MYL6P5-201ENST00000412707 459 ntBASIC5.51□□□□□ -1.53
HMGN1P05114 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGN1P05114 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGN1P05114 HMGN2P27-201ENST00000427352 270 ntBASIC5.51□□□□□ -1.53
HMGN1P05114 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGN1P05114 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGN1P05114 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGN1P05114 RPS4XP12-201ENST00000461747 709 ntBASIC5.51□□□□□ -1.53
HMGN1P05114 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGN1P05114 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGN1P05114 AC008868.1-201ENST00000509786 737 ntBASIC5.51□□□□□ -1.53
HMGN1P05114 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGN1P05114 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGN1P05114 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGN1P05114 AC244502.2-201ENST00000543361 851 ntBASIC5.51□□□□□ -1.53
HMGN1P05114 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
HMGN1P05114 CHEK2P2-201ENST00000554701 672 ntBASIC5.51□□□□□ -1.53
HMGN1P05114 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGN1P05114 AC091304.5-201ENST00000568969 158 ntBASIC5.51□□□□□ -1.53
HMGN1P05114 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGN1P05114 RNU4ATAC-201ENST00000580972 127 ntBASIC5.51□□□□□ -1.53
HMGN1P05114 AC139792.1-201ENST00000607051 647 ntBASIC5.51□□□□□ -1.53
HMGN1P05114 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGN1P05114 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGN1P05114 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGN1P05114 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGN1P05114 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.51□□□□□ -1.53
HMGN1P05114 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGN1P05114 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGN1P05114 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGN1P05114 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HMGN1P05114 AL359955.1-201ENST00000455242 3275 ntBASIC5.51□□□□□ -1.53
HMGN1P05114 CASC19-248ENST00000641674 1356 ntBASIC5.51□□□□□ -1.53
HMGN1P05114 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
HMGN1P05114 BCORP1-203ENST00000513194 5093 ntBASIC5.51□□□□□ -1.53
HMGN1P05114 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGN1P05114 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGN1P05114 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.51□□□□□ -1.53
HMGN1P05114 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HMGN1P05114 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGN1P05114 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.5□□□□□ -1.53
HMGN1P05114 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGN1P05114 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGN1P05114 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGN1P05114 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HMGN1P05114 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGN1P05114 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HMGN1P05114 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGN1P05114 SNORA7A-201ENST00000384765 139 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGN1P05114 ELOBP4-201ENST00000423418 296 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 GPN3P1-201ENST00000423883 535 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 AP003385.1-201ENST00000426387 893 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 NPM1P23-201ENST00000440193 849 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 GAPDHP37-201ENST00000442317 968 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 AL158214.1-201ENST00000444423 404 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.5□□□□□ -1.53
HMGN1P05114 AL354872.1-201ENST00000456361 967 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 RPL5P33-201ENST00000487833 905 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGN1P05114 OR4D12P-201ENST00000509361 911 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGN1P05114 Y_RNA.710-201ENST00000516975 110 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGN1P05114 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.5□□□□□ -1.53
HMGN1P05114 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGN1P05114 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGN1P05114 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGN1P05114 AC103855.4-201ENST00000533158 265 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGN1P05114 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGN1P05114 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGN1P05114 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGN1P05114 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGN1P05114 AC090286.3-201ENST00000573133 187 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 AP001357.1-201ENST00000586304 1053 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 AC026898.1-201ENST00000586404 571 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGN1P05114 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGN1P05114 AC006115.2-201ENST00000596823 202 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGN1P05114 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.5□□□□□ -1.53
HMGN1P05114 AC008555.7-201ENST00000605008 583 ntBASIC5.5□□□□□ -1.53
HMGN1P05114 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGN1P05114 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.5□□□□□ -1.53
HMGN1P05114 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGN1P05114 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGN1P05114 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HMGN1P05114 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGN1P05114 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGN1P05114 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGN1P05114 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGN1P05114 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGN1P05114 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms