Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.08□□□□□ -1.6
CD74P04233 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD74P04233 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD74P04233 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD74P04233 AC087752.1-201ENST00000391360 558 ntBASIC5.08□□□□□ -1.6
CD74P04233 RPL11P3-201ENST00000395256 523 ntBASIC5.08□□□□□ -1.6
CD74P04233 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD74P04233 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.08□□□□□ -1.6
CD74P04233 YWHAZP5-201ENST00000419975 730 ntBASIC5.08□□□□□ -1.6
CD74P04233 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.08□□□□□ -1.6
CD74P04233 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.08□□□□□ -1.6
CD74P04233 AL589794.1-201ENST00000424971 390 ntBASIC5.08□□□□□ -1.6
CD74P04233 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.08□□□□□ -1.6
CD74P04233 AL512593.1-201ENST00000444758 779 ntBASIC5.08□□□□□ -1.6
CD74P04233 AL356133.1-201ENST00000444762 372 ntBASIC5.08□□□□□ -1.6
CD74P04233 AL161722.1-201ENST00000446972 1032 ntBASIC5.08□□□□□ -1.6
CD74P04233 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.08□□□□□ -1.6
CD74P04233 RPL12P39-201ENST00000455456 496 ntBASIC5.08□□□□□ -1.6
CD74P04233 OR7E157P-201ENST00000494376 911 ntBASIC5.08□□□□□ -1.6
CD74P04233 RPL10P7-201ENST00000495649 625 ntBASIC5.08□□□□□ -1.6
CD74P04233 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.08□□□□□ -1.6
CD74P04233 OR7E99P-201ENST00000505750 922 ntBASIC5.08□□□□□ -1.6
CD74P04233 AC093325.1-201ENST00000508378 326 ntBASIC5.08□□□□□ -1.6
CD74P04233 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.08□□□□□ -1.6
CD74P04233 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.08□□□□□ -1.6
CD74P04233 RNU6-1334P-201ENST00000516032 105 ntBASIC5.08□□□□□ -1.6
CD74P04233 RN7SKP64-201ENST00000517206 328 ntBASIC5.08□□□□□ -1.6
CD74P04233 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.08□□□□□ -1.6
CD74P04233 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.08□□□□□ -1.6
CD74P04233 AL121594.2-201ENST00000541658 472 ntBASIC5.08□□□□□ -1.6
CD74P04233 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.08□□□□□ -1.6
CD74P04233 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.08□□□□□ -1.6
CD74P04233 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.08□□□□□ -1.6
CD74P04233 PPIAP14-201ENST00000577627 496 ntBASIC5.08□□□□□ -1.6
CD74P04233 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.08□□□□□ -1.6
CD74P04233 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.08□□□□□ -1.6
CD74P04233 AL022394.1-201ENST00000606979 292 ntBASIC5.08□□□□□ -1.6
CD74P04233 AL133481.2-203ENST00000607558 139 ntBASIC5.08□□□□□ -1.6
CD74P04233 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.08□□□□□ -1.6
CD74P04233 MIR6070-201ENST00000613967 103 ntBASIC5.08□□□□□ -1.6
CD74P04233 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.08□□□□□ -1.6
CD74P04233 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CD74P04233 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CD74P04233 AC011416.1-201ENST00000514947 1732 ntBASIC5.08□□□□□ -1.6
CD74P04233 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD74P04233 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD74P04233 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD74P04233 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.08□□□□□ -1.6
CD74P04233 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CD74P04233 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.08□□□□□ -1.6
CD74P04233 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD74P04233 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.07□□□□□ -1.6
CD74P04233 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CD74P04233 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CD74P04233 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.07□□□□□ -1.6
CD74P04233 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 RN7SKP185-201ENST00000362813 326 ntBASIC5.07□□□□□ -1.6
CD74P04233 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.07□□□□□ -1.6
CD74P04233 RN7SKP221-201ENST00000410420 301 ntBASIC5.07□□□□□ -1.6
CD74P04233 E2F6P1-201ENST00000428850 745 ntBASIC5.07□□□□□ -1.6
CD74P04233 VN1R53P-201ENST00000429536 957 ntBASIC5.07□□□□□ -1.6
CD74P04233 RPL3P11-201ENST00000434028 1146 ntBASIC5.07□□□□□ -1.6
CD74P04233 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 AC096632.2-201ENST00000438139 1239 ntBASIC5.07□□□□□ -1.6
CD74P04233 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.07□□□□□ -1.6
CD74P04233 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 E2F6P3-201ENST00000441743 743 ntBASIC5.07□□□□□ -1.6
CD74P04233 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.07□□□□□ -1.6
CD74P04233 AC023271.1-201ENST00000445936 1090 ntBASIC5.07□□□□□ -1.6
CD74P04233 AKR1D1P1-201ENST00000457236 936 ntBASIC5.07□□□□□ -1.6
CD74P04233 RN7SL197P-201ENST00000466981 299 ntBASIC5.07□□□□□ -1.6
CD74P04233 RPL12P31-201ENST00000478433 450 ntBASIC5.07□□□□□ -1.6
CD74P04233 AL079303.1-201ENST00000486611 463 ntBASIC5.07□□□□□ -1.6
CD74P04233 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.07□□□□□ -1.6
CD74P04233 AC105420.1-201ENST00000504389 582 ntBASIC5.07□□□□□ -1.6
CD74P04233 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.07□□□□□ -1.6
CD74P04233 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.07□□□□□ -1.6
CD74P04233 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.07□□□□□ -1.6
CD74P04233 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.07□□□□□ -1.6
CD74P04233 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.07□□□□□ -1.6
CD74P04233 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.07□□□□□ -1.6
CD74P04233 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.07□□□□□ -1.6
CD74P04233 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.07□□□□□ -1.6
CD74P04233 AC084824.2-201ENST00000548906 345 ntBASIC5.07□□□□□ -1.6
CD74P04233 BMS1P16-201ENST00000556075 1147 ntBASIC5.07□□□□□ -1.6
CD74P04233 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD74P04233 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.07□□□□□ -1.6
CD74P04233 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.07□□□□□ -1.6
CD74P04233 OR7E19P-202ENST00000589942 844 ntBASIC5.07□□□□□ -1.6
CD74P04233 AC012175.1-201ENST00000603755 531 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms