Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6□□□□□ -1.45
SHOX2O60902 AP001858.2-201ENST00000536213 601 ntBASIC6□□□□□ -1.45
SHOX2O60902 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6□□□□□ -1.45
SHOX2O60902 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6□□□□□ -1.45
SHOX2O60902 RN7SL131P-201ENST00000579043 256 ntBASIC6□□□□□ -1.45
SHOX2O60902 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6□□□□□ -1.45
SHOX2O60902 AC141002.1-201ENST00000607025 279 ntBASIC6□□□□□ -1.45
SHOX2O60902 AC016590.3-201ENST00000611171 753 ntBASIC6□□□□□ -1.45
SHOX2O60902 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6□□□□□ -1.45
SHOX2O60902 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
SHOX2O60902 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6□□□□□ -1.45
SHOX2O60902 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHOX2O60902 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.99□□□□□ -1.45
SHOX2O60902 AL133243.2-201ENST00000610331 1621 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHOX2O60902 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
SHOX2O60902 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.99□□□□□ -1.45
SHOX2O60902 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.99□□□□□ -1.45
SHOX2O60902 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHOX2O60902 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.99□□□□□ -1.45
SHOX2O60902 AC095038.1-201ENST00000429248 1591 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.99□□□□□ -1.45
SHOX2O60902 RN7SKP269-201ENST00000365545 319 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHOX2O60902 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHOX2O60902 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.99□□□□□ -1.45
SHOX2O60902 MICG-208ENST00000416822 132 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 RPL18AP14-201ENST00000417685 526 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.99□□□□□ -1.45
SHOX2O60902 AC083862.1-201ENST00000427378 1242 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 TCEA1P3-201ENST00000443005 880 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 SDC4P-201ENST00000453285 601 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.99□□□□□ -1.45
SHOX2O60902 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.99□□□□□ -1.45
SHOX2O60902 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
SHOX2O60902 RPL12P24-201ENST00000474907 486 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 RPL21P42-201ENST00000488408 464 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.99□□□□□ -1.45
SHOX2O60902 SNX18P24-201ENST00000505249 671 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 NPM1P21-201ENST00000513394 762 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 IGHV4-55-201ENST00000520889 368 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.99□□□□□ -1.45
SHOX2O60902 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHOX2O60902 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.99□□□□□ -1.45
SHOX2O60902 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.99□□□□□ -1.45
SHOX2O60902 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHOX2O60902 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.99□□□□□ -1.45
SHOX2O60902 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.99□□□□□ -1.45
SHOX2O60902 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.99□□□□□ -1.45
SHOX2O60902 AC007448.1-201ENST00000582714 234 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.99□□□□□ -1.45
SHOX2O60902 AL591167.1-201ENST00000607321 456 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 Z93930.3-201ENST00000607919 749 ntBASIC5.99□□□□□ -1.45
SHOX2O60902 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.99□□□□□ -1.45
SHOX2O60902 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.99□□□□□ -1.45
SHOX2O60902 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHOX2O60902 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHOX2O60902 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.99□□□□□ -1.45
SHOX2O60902 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHOX2O60902 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SHOX2O60902 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.98□□□□□ -1.45
SHOX2O60902 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHOX2O60902 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.98□□□□□ -1.45
SHOX2O60902 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
SHOX2O60902 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.98□□□□□ -1.45
SHOX2O60902 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.98□□□□□ -1.45
SHOX2O60902 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.98□□□□□ -1.45
SHOX2O60902 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.98□□□□□ -1.45
SHOX2O60902 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHOX2O60902 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHOX2O60902 RN7SKP184-201ENST00000362348 333 ntBASIC5.98□□□□□ -1.45
SHOX2O60902 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHOX2O60902 RNU1-136P-201ENST00000384181 164 ntBASIC5.98□□□□□ -1.45
SHOX2O60902 AL079341.1-201ENST00000404701 1207 ntBASIC5.98□□□□□ -1.45
SHOX2O60902 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHOX2O60902 AL133482.1-201ENST00000415988 498 ntBASIC5.98□□□□□ -1.45
SHOX2O60902 REREP1Y-201ENST00000422655 198 ntBASIC5.98□□□□□ -1.45
SHOX2O60902 RPS7P14-201ENST00000426405 583 ntBASIC5.98□□□□□ -1.45
SHOX2O60902 PUDPP2-201ENST00000431423 643 ntBASIC5.98□□□□□ -1.45
SHOX2O60902 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.98□□□□□ -1.45
SHOX2O60902 AC096775.1-201ENST00000437724 448 ntBASIC5.98□□□□□ -1.45
SHOX2O60902 REREP2Y-201ENST00000439103 200 ntBASIC5.98□□□□□ -1.45
SHOX2O60902 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.98□□□□□ -1.45
SHOX2O60902 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.98□□□□□ -1.45
SHOX2O60902 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHOX2O60902 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.98□□□□□ -1.45
SHOX2O60902 FTH1P11-201ENST00000517577 551 ntBASIC5.98□□□□□ -1.45
SHOX2O60902 AL133399.1-201ENST00000527476 298 ntBASIC5.98□□□□□ -1.45
SHOX2O60902 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.98□□□□□ -1.45
SHOX2O60902 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.98□□□□□ -1.45
SHOX2O60902 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHOX2O60902 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms