Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX3O60493 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX3O60493 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.85□□□□□ -1.47
SNX3O60493 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX3O60493 AL121839.2-201ENST00000565058 6943 ntBASIC5.85□□□□□ -1.47
SNX3O60493 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SNX3O60493 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX3O60493 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNX3O60493 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX3O60493 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNX3O60493 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNX3O60493 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX3O60493 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNX3O60493 SMG1P5-202ENST00000529428 4219 ntBASIC5.84□□□□□ -1.47
SNX3O60493 SMG1P2-201ENST00000566127 4221 ntBASIC5.84□□□□□ -1.47
SNX3O60493 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.84□□□□□ -1.47
SNX3O60493 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNX3O60493 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.84□□□□□ -1.47
SNX3O60493 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.84□□□□□ -1.47
SNX3O60493 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.84□□□□□ -1.47
SNX3O60493 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SNX3O60493 RN7SKP191-201ENST00000364713 306 ntBASIC5.84□□□□□ -1.47
SNX3O60493 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SNX3O60493 RNA5SP91-201ENST00000390902 119 ntBASIC5.84□□□□□ -1.47
SNX3O60493 AL050305.1-201ENST00000399993 1230 ntBASIC5.84□□□□□ -1.47
SNX3O60493 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC5.84□□□□□ -1.47
SNX3O60493 AC009784.1-201ENST00000426484 460 ntBASIC5.84□□□□□ -1.47
SNX3O60493 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.84□□□□□ -1.47
SNX3O60493 YY1P1-201ENST00000427625 668 ntBASIC5.84□□□□□ -1.47
SNX3O60493 AC108479.1-201ENST00000431142 427 ntBASIC5.84□□□□□ -1.47
SNX3O60493 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX3O60493 UBE2V2P3-201ENST00000433562 437 ntBASIC5.84□□□□□ -1.47
SNX3O60493 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC5.84□□□□□ -1.47
SNX3O60493 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.84□□□□□ -1.47
SNX3O60493 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.84□□□□□ -1.47
SNX3O60493 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX3O60493 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.84□□□□□ -1.47
SNX3O60493 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX3O60493 AP002371.1-201ENST00000463604 433 ntBASIC5.84□□□□□ -1.47
SNX3O60493 RN7SL314P-201ENST00000490735 292 ntBASIC5.84□□□□□ -1.47
SNX3O60493 RN7SL445P-201ENST00000495609 293 ntBASIC5.84□□□□□ -1.47
SNX3O60493 GAPDHP38-201ENST00000503632 1002 ntBASIC5.84□□□□□ -1.47
SNX3O60493 MORF4L2P1-201ENST00000503761 858 ntBASIC5.84□□□□□ -1.47
SNX3O60493 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.84□□□□□ -1.47
SNX3O60493 SNORD116-30-201ENST00000516468 85 ntBASIC5.84□□□□□ -1.47
SNX3O60493 RNU4-18P-201ENST00000516751 149 ntBASIC5.84□□□□□ -1.47
SNX3O60493 SEPT10P1-201ENST00000517342 1162 ntBASIC5.84□□□□□ -1.47
SNX3O60493 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX3O60493 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX3O60493 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX3O60493 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.84□□□□□ -1.47
SNX3O60493 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.84□□□□□ -1.47
SNX3O60493 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX3O60493 RPS4XP21-201ENST00000603814 750 ntBASIC5.84□□□□□ -1.47
SNX3O60493 HIRAP1-201ENST00000605318 787 ntBASIC5.84□□□□□ -1.47
SNX3O60493 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.84□□□□□ -1.47
SNX3O60493 AC022106.1-201ENST00000612834 766 ntBASIC5.84□□□□□ -1.47
SNX3O60493 AC097641.3-201ENST00000613523 464 ntBASIC5.84□□□□□ -1.47
SNX3O60493 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX3O60493 AC243960.7-201ENST00000623532 707 ntBASIC5.84□□□□□ -1.47
SNX3O60493 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.84□□□□□ -1.47
SNX3O60493 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNX3O60493 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNX3O60493 OR9K1P-202ENST00000641111 3217 ntBASIC5.84□□□□□ -1.47
SNX3O60493 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX3O60493 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SNX3O60493 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNX3O60493 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SNX3O60493 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX3O60493 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.84□□□□□ -1.48
SNX3O60493 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SNX3O60493 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SNX3O60493 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX3O60493 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNX3O60493 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNX3O60493 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX3O60493 GTF2IP4-201ENST00000453092 2054 ntBASIC5.83□□□□□ -1.48
SNX3O60493 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX3O60493 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX3O60493 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX3O60493 RNA5SP211-201ENST00000365516 117 ntBASIC5.83□□□□□ -1.48
SNX3O60493 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX3O60493 RNU1-136P-201ENST00000384181 164 ntBASIC5.83□□□□□ -1.48
SNX3O60493 EEF1GP6-201ENST00000402309 905 ntBASIC5.83□□□□□ -1.48
SNX3O60493 AL358178.1-201ENST00000407698 397 ntBASIC5.83□□□□□ -1.48
SNX3O60493 RN7SKP221-201ENST00000410420 301 ntBASIC5.83□□□□□ -1.48
SNX3O60493 CASKP1-201ENST00000412870 582 ntBASIC5.83□□□□□ -1.48
SNX3O60493 CLIC4P3-201ENST00000422221 752 ntBASIC5.83□□□□□ -1.48
SNX3O60493 RPS21P1-201ENST00000434479 247 ntBASIC5.83□□□□□ -1.48
SNX3O60493 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX3O60493 CHCHD4P5-201ENST00000436684 427 ntBASIC5.83□□□□□ -1.48
SNX3O60493 SOCS5P1-201ENST00000440415 949 ntBASIC5.83□□□□□ -1.48
SNX3O60493 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX3O60493 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX3O60493 RPS3AP49-201ENST00000472161 790 ntBASIC5.83□□□□□ -1.48
SNX3O60493 PFN1P6-201ENST00000476786 399 ntBASIC5.83□□□□□ -1.48
SNX3O60493 AC112184.1-201ENST00000505179 312 ntBASIC5.83□□□□□ -1.48
SNX3O60493 OR4D12P-201ENST00000509361 911 ntBASIC5.83□□□□□ -1.48
SNX3O60493 RPL7L1P7-201ENST00000509986 724 ntBASIC5.83□□□□□ -1.48
SNX3O60493 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms