Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.63□□□□□ -1.51
ZIC3O60481 AC011369.2-201ENST00000624423 1567 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ZIC3O60481 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.63□□□□□ -1.51
ZIC3O60481 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ZIC3O60481 DOCK11P1-201ENST00000553480 5932 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
ZIC3O60481 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
ZIC3O60481 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.62□□□□□ -1.51
ZIC3O60481 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.62□□□□□ -1.51
ZIC3O60481 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
ZIC3O60481 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
ZIC3O60481 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.62□□□□□ -1.51
ZIC3O60481 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.62□□□□□ -1.51
ZIC3O60481 RNU6-1176P-201ENST00000390955 107 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 RNU11-6P-201ENST00000391127 133 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 VN1R12P-201ENST00000403778 876 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.62□□□□□ -1.51
ZIC3O60481 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.62□□□□□ -1.51
ZIC3O60481 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.62□□□□□ -1.51
ZIC3O60481 AC096644.3-201ENST00000416788 338 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.62□□□□□ -1.51
ZIC3O60481 MTND4LP7-201ENST00000431728 294 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.62□□□□□ -1.51
ZIC3O60481 PSMD10P2-201ENST00000432890 672 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.62□□□□□ -1.51
ZIC3O60481 AL355355.1-201ENST00000442900 793 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 OR13K1P-201ENST00000444577 975 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 GAPDHP23-201ENST00000444823 993 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 OR52I1-201ENST00000450052 1050 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 AC115223.1-201ENST00000466377 870 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 MTND3P24-201ENST00000506306 329 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.62□□□□□ -1.51
ZIC3O60481 AC090958.1-201ENST00000511122 351 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
ZIC3O60481 AP005639.1-201ENST00000526939 192 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 BCAS2P1-201ENST00000528022 632 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 RPA2P3-201ENST00000533268 770 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.62□□□□□ -1.51
ZIC3O60481 AC010547.7-201ENST00000570323 333 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.62□□□□□ -1.51
ZIC3O60481 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.62□□□□□ -1.51
ZIC3O60481 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.62□□□□□ -1.51
ZIC3O60481 AL391001.1-201ENST00000602747 715 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 AC098483.2-201ENST00000603158 454 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 OR4H6P-202ENST00000603819 340 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 AC024589.2-201ENST00000605642 1294 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.62□□□□□ -1.51
ZIC3O60481 AC135803.1-201ENST00000608748 565 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.62□□□□□ -1.51
ZIC3O60481 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
ZIC3O60481 AC006249.1-201ENST00000621223 471 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.62□□□□□ -1.51
ZIC3O60481 AP001052.1-201ENST00000626421 99 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 OR7A1P-202ENST00000641542 1158 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.62□□□□□ -1.51
ZIC3O60481 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 AL929601.4-201ENST00000613011 1341 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 AP001541.1-201ENST00000623322 1904 ntBASIC5.62□□□□□ -1.51
ZIC3O60481 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.62□□□□□ -1.51
ZIC3O60481 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZIC3O60481 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZIC3O60481 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ZIC3O60481 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.61□□□□□ -1.51
ZIC3O60481 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ZIC3O60481 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
ZIC3O60481 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZIC3O60481 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZIC3O60481 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
ZIC3O60481 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.61□□□□□ -1.51
ZIC3O60481 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.61□□□□□ -1.51
ZIC3O60481 SNORA43.1-201ENST00000364863 140 ntBASIC5.61□□□□□ -1.51
ZIC3O60481 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.61□□□□□ -1.51
ZIC3O60481 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZIC3O60481 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ZIC3O60481 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.61□□□□□ -1.51
ZIC3O60481 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ZIC3O60481 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.61□□□□□ -1.51
ZIC3O60481 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.61□□□□□ -1.51
ZIC3O60481 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.61□□□□□ -1.51
ZIC3O60481 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.61□□□□□ -1.51
ZIC3O60481 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.61□□□□□ -1.51
ZIC3O60481 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.61□□□□□ -1.51
ZIC3O60481 PNKDP1-201ENST00000435914 430 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms