Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC090568.1-201ENST00000509499 856 ntBASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 RPA2P3-201ENST00000533268 770 ntBASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC007346.1-201ENST00000569208 867 ntBASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 RN7SL475P-201ENST00000583379 298 ntBASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC027334.1-201ENST00000603257 310 ntBASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC015982.1-201ENST00000608113 465 ntBASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AP001437.1-201ENST00000608783 456 ntBASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TCRBV4S1A1TA0A5B7 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 HDAC1P2-201ENST00000453661 1398 ntBASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC114876.1-201ENST00000490962 1366 ntBASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AP001541.1-201ENST00000623322 1904 ntBASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AL445238.1-204ENST00000400311 463 ntBASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AL096800.1-201ENST00000405326 893 ntBASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 RPSAP65-201ENST00000429660 595 ntBASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AL133351.3-201ENST00000454998 193 ntBASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 CYP4F27P-201ENST00000514557 494 ntBASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 NATP-201ENST00000523491 878 ntBASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 NPIPB1P-202ENST00000588786 828 ntBASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC069234.4-201ENST00000621276 412 ntBASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AL136984.1-201ENST00000607611 1893 ntBASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 Z95114.1-201ENST00000624264 14574 ntBASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.91□□□□□ -1.62
TCRBV4S1A1TA0A5B7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.9□□□□□ -1.62
TCRBV4S1A1TA0A5B7 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TCRBV4S1A1TA0A5B7 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.9□□□□□ -1.62
TCRBV4S1A1TA0A5B7 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.9□□□□□ -1.62
TCRBV4S1A1TA0A5B7 RNA5SP346-201ENST00000363541 121 ntBASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 RBMY2AP-201ENST00000445405 1157 ntBASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 RBMY2CP-201ENST00000448575 1157 ntBASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 RBMY2DP-202ENST00000448881 1157 ntBASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 RBMY2BP-202ENST00000451071 1156 ntBASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 SUMO2P10-201ENST00000452006 288 ntBASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC112187.1-201ENST00000455837 479 ntBASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 RANP2-201ENST00000456833 229 ntBASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.9□□□□□ -1.63
TCRBV4S1A1TA0A5B7 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms