Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 API5P1-201ENST00000424316 1510 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC062022.1-201ENST00000451026 1684 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC005618.1-201ENST00000606901 3148 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 MRPS21P5-201ENST00000417885 231 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC092570.3-201ENST00000420113 693 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC006065.1-201ENST00000422539 802 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 HMGB3P10-201ENST00000434734 572 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC093166.3-201ENST00000448785 303 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC069277.2-201ENST00000454211 432 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 MTCYBP19-201ENST00000517463 1124 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 OR4A40P-201ENST00000533878 948 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 UBTFL9-201ENST00000534504 1148 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC087888.1-201ENST00000550884 1254 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 BUB1P1-201ENST00000603541 607 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AL157899.1-201ENST00000604110 936 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 RPL23AP61-201ENST00000623642 466 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC073488.9-201ENST00000631601 754 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 AC008957.3-201ENST00000624112 2242 ntBASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
COL4A3BPQ9Y5P4 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 RNA5SP188-201ENST00000362916 129 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 RN7SKP250-201ENST00000363924 321 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 MRPS6P2-201ENST00000381143 370 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 RN7SKP129-201ENST00000410288 299 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AL139184.1-202ENST00000422303 222 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AC013410.2-201ENST00000422627 201 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 GPN3P1-201ENST00000423883 535 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 BMP6P1-201ENST00000431230 679 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 PA2G4P6-201ENST00000438325 1197 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AL020997.1-201ENST00000446554 349 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AC008429.2-201ENST00000523057 864 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 OR52K3P-201ENST00000531655 943 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AC068339.2-201ENST00000534395 618 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 TDGP1-201ENST00000543961 1229 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 CBX3P2-202ENST00000583365 535 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AC012368.3-201ENST00000604190 219 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AC009779.8-202ENST00000607990 932 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AL391834.1-201ENST00000609609 560 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms