Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NPC1L1Q9UHC9 EIF3EP2-201ENST00000423042 1814 ntBASIC8.05□□□□□ -1.12
NPC1L1Q9UHC9 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NPC1L1Q9UHC9 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 SNORA51.1-201ENST00000363243 140 ntBASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 SNORD1C-201ENST00000363315 78 ntBASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 OR7E101P-201ENST00000400428 513 ntBASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 TUBB4BP6-201ENST00000437576 479 ntBASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 HLA-DPA3-207ENST00000454398 229 ntBASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 SCARNA21.2-201ENST00000516600 166 ntBASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 AL121594.2-201ENST00000541658 472 ntBASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 AC006530.1-201ENST00000555980 571 ntBASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 MIR6886-201ENST00000619864 61 ntBASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 OR13C1P-202ENST00000641378 2919 ntBASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
NPC1L1Q9UHC9 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 ST7-203ENST00000393443 2360 ntTSL 2 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 AL512422.1-201ENST00000407033 553 ntBASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 AC104843.2-201ENST00000427666 297 ntBASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 HNRNPA1P18-201ENST00000433537 927 ntBASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 AL512637.1-201ENST00000439523 1231 ntBASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 HMGN2P36-201ENST00000529541 409 ntBASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 AL139099.4-201ENST00000614802 114 ntBASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 AL137918.1-201ENST00000624542 1922 ntBASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPC1L1Q9UHC9 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
NPC1L1Q9UHC9 UG0898H09-202ENST00000623646 7040 ntBASIC8.02□□□□□ -1.12
NPC1L1Q9UHC9 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
NPC1L1Q9UHC9 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 LYPLA1P3-201ENST00000402650 695 ntBASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 HMGN1P20-201ENST00000411849 300 ntBASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 AL035660.1-201ENST00000422041 222 ntBASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 AC096775.1-201ENST00000437724 448 ntBASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 AC015983.1-201ENST00000441577 373 ntBASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 AC093166.4-201ENST00000457867 318 ntBASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 AL603882.1-201ENST00000463059 681 ntBASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms