Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LRFN1Q9P244 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 RNA5SP485-201ENST00000365053 119 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LRFN1Q9P244 MT-TP-201ENST00000387461 68 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LRFN1Q9P244 RN7SKP129-201ENST00000410288 299 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 RPSAP32-201ENST00000432681 526 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC007383.1-201ENST00000445875 636 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 RBMY2TP-201ENST00000451162 947 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AL390728.3-201ENST00000452704 270 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC108751.3-201ENST00000461814 1020 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 PGBD4P1-201ENST00000473644 407 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC026254.2-201ENST00000475295 371 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 MTCO2P9-201ENST00000503214 694 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 MTND6P8-201ENST00000503471 522 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 GUSBP9-201ENST00000510138 584 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 OR4A17P-201ENST00000526032 904 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC087888.1-201ENST00000550884 1254 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AL512310.9-201ENST00000553311 948 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 SYPL1P2-201ENST00000582878 727 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC245052.7-201ENST00000601161 359 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 WBP1LP12-201ENST00000604449 331 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AL589743.6-201ENST00000611025 117 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC012676.3-201ENST00000614983 479 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 MIR6778-201ENST00000617912 73 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 SNX18P10-201ENST00000625014 519 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.1□□□□□ -1.43
LRFN1Q9P244 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
LRFN1Q9P244 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LRFN1Q9P244 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LRFN1Q9P244 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LRFN1Q9P244 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC096992.2-201ENST00000609553 1684 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 AC018628.1-201ENST00000624147 3819 ntBASIC6.1□□□□□ -1.43
LRFN1Q9P244 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LRFN1Q9P244 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
LRFN1Q9P244 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.09□□□□□ -1.43
LRFN1Q9P244 AC093278.2-201ENST00000564956 2485 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 PROS2P-201ENST00000474651 1951 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LRFN1Q9P244 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LRFN1Q9P244 AL359715.4-201ENST00000606629 1436 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LRFN1Q9P244 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LRFN1Q9P244 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
LRFN1Q9P244 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LRFN1Q9P244 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LRFN1Q9P244 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
LRFN1Q9P244 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LRFN1Q9P244 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
LRFN1Q9P244 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LRFN1Q9P244 RNA5SP232-201ENST00000364144 119 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 RNU4-7P-201ENST00000364758 141 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
LRFN1Q9P244 TAF9BP2-201ENST00000400856 499 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.09□□□□□ -1.43
LRFN1Q9P244 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.09□□□□□ -1.43
LRFN1Q9P244 AC245452.2-201ENST00000435222 392 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 FABP5P2-201ENST00000439042 408 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 TIMM8BP2-201ENST00000445940 251 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 TVP23CP1-201ENST00000450317 639 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 CCNJP1-201ENST00000450600 1149 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 RPL23AP23-201ENST00000452590 471 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 AC118758.1-202ENST00000454719 225 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 AC092902.1-201ENST00000486999 259 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 RN7SL205P-201ENST00000490174 284 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 RPS27P20-201ENST00000492051 246 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.09□□□□□ -1.43
LRFN1Q9P244 BTG4P1-201ENST00000510421 183 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.09□□□□□ -1.43
LRFN1Q9P244 AC093816.1-201ENST00000515076 913 ntBASIC6.09□□□□□ -1.43
LRFN1Q9P244 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.09□□□□□ -1.43
LRFN1Q9P244 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.09□□□□□ -1.43
LRFN1Q9P244 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.09□□□□□ -1.43
LRFN1Q9P244 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.09□□□□□ -1.43
LRFN1Q9P244 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.09□□□□□ -1.43
LRFN1Q9P244 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms