Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 LYARP1-201ENST00000436977 1501 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 RNA5SP435-201ENST00000364044 108 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 LCN1P2-201ENST00000372030 223 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 MRRF-207ENST00000373729 870 ntTSL 3 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 RN7SL221P-201ENST00000466190 281 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 RPL23AP73-201ENST00000492507 471 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC015864.1-201ENST00000496512 544 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 RPL5P11-201ENST00000498068 893 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 MTCO2P9-201ENST00000503214 694 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC090616.1-201ENST00000583895 447 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC008507.3-201ENST00000585753 472 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC092266.1-201ENST00000610958 165 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC005156.1-201ENST00000613371 573 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC018926.1-201ENST00000616335 435 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 FAM27E2-201ENST00000619668 403 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 MRPL57P1-201ENST00000621486 265 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC097460.3-201ENST00000623099 442 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 CASC19-261ENST00000641853 1638 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC062022.1-201ENST00000451026 1684 ntBASIC7.22□□□□□ -1.25
VTA1Q9NP79 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.21□□□□□ -1.25
VTA1Q9NP79 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.21□□□□□ -1.25
VTA1Q9NP79 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
VTA1Q9NP79 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
VTA1Q9NP79 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
VTA1Q9NP79 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
VTA1Q9NP79 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
VTA1Q9NP79 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.21□□□□□ -1.25
VTA1Q9NP79 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
VTA1Q9NP79 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
VTA1Q9NP79 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
VTA1Q9NP79 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
VTA1Q9NP79 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
VTA1Q9NP79 CUBNP3-201ENST00000457461 1784 ntBASIC7.21□□□□□ -1.25
VTA1Q9NP79 AC093225.1-201ENST00000506867 1408 ntBASIC7.21□□□□□ -1.25
VTA1Q9NP79 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
VTA1Q9NP79 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VTA1Q9NP79 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 SNORA51.9-201ENST00000384295 124 ntBASIC7.21□□□□□ -1.26
VTA1Q9NP79 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 RPL36P18-201ENST00000419316 318 ntBASIC7.21□□□□□ -1.26
VTA1Q9NP79 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 NAP1L4P2-201ENST00000425958 899 ntBASIC7.21□□□□□ -1.26
VTA1Q9NP79 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 AL513321.1-201ENST00000441175 761 ntBASIC7.21□□□□□ -1.26
VTA1Q9NP79 GAPDHP16-201ENST00000448152 962 ntBASIC7.21□□□□□ -1.26
VTA1Q9NP79 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VTA1Q9NP79 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 RN7SL714P-201ENST00000487050 298 ntBASIC7.21□□□□□ -1.26
VTA1Q9NP79 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
VTA1Q9NP79 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
VTA1Q9NP79 RNU6-415P-201ENST00000516252 97 ntBASIC7.21□□□□□ -1.26
VTA1Q9NP79 IGKV3D-25-201ENST00000519599 235 ntBASIC7.21□□□□□ -1.26
VTA1Q9NP79 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms