Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL359885.1-201ENST00000415786 903 ntBASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 THEM7P-201ENST00000419556 672 ntBASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 PSMD10P2-201ENST00000432890 672 ntBASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 OR3D1P-201ENST00000438288 955 ntBASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 KRT8P51-201ENST00000438938 274 ntBASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 AL645936.1-201ENST00000441979 518 ntBASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 TIMM8BP2-201ENST00000445940 251 ntBASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 AC122718.2-201ENST00000505325 591 ntBASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 AC078899.1-201ENST00000521432 1185 ntBASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 RFPL4AP6-201ENST00000616792 846 ntBASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 MAPK10-350ENST00000641777 965 ntBASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 MIR188-201ENST00000385034 86 ntBASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 MYL6P5-201ENST00000412707 459 ntBASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 RPL35AP31-201ENST00000418340 337 ntBASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 RPSAP65-201ENST00000429660 595 ntBASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 CTSLP6-201ENST00000458273 1002 ntBASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 RN7SL269P-201ENST00000467795 305 ntBASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 ST13P12-201ENST00000508958 1094 ntBASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 snoU109.5-201ENST00000516231 132 ntBASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 AC121758.1-202ENST00000556917 658 ntBASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 MRPS21P8-201ENST00000569196 235 ntBASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 AL512652.1-201ENST00000619006 500 ntBASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 AC073488.6-201ENST00000632293 754 ntBASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 PPBPP2-201ENST00000513150 1362 ntBASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RSPO3Q9BXY4 AC130360.2-201ENST00000533477 1556 ntBASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 FUNDC2P3-201ENST00000334716 533 ntBASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 OR10R3P-201ENST00000361688 942 ntBASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 NMD3P2-201ENST00000421815 761 ntBASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 AC245884.2-201ENST00000426257 404 ntBASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 AC016027.4-201ENST00000450866 277 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms