Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.4□□□□□ -1.54
SSX3Q99909 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX3Q99909 AL358913.1-201ENST00000554342 121 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 AC005519.1-201ENST00000554490 601 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX3Q99909 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX3Q99909 AP003115.1-201ENST00000569849 463 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX3Q99909 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.4□□□□□ -1.54
SSX3Q99909 AC091133.5-201ENST00000603088 301 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 AC092944.2-201ENST00000605443 889 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 AC138473.1-201ENST00000605717 526 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX3Q99909 AC010333.3-201ENST00000615100 402 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 RNU6-368P-201ENST00000620928 107 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 RNU6-538P-201ENST00000622329 107 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX3Q99909 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX3Q99909 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SSX3Q99909 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SSX3Q99909 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SSX3Q99909 AC093849.1-201ENST00000563631 2209 ntBASIC5.4□□□□□ -1.55
SSX3Q99909 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
SSX3Q99909 AC020658.2-201ENST00000559030 4020 ntBASIC5.4□□□□□ -1.55
SSX3Q99909 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SSX3Q99909 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.4□□□□□ -1.55
SSX3Q99909 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
SSX3Q99909 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SSX3Q99909 AC004158.1-201ENST00000564508 4319 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
SSX3Q99909 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX3Q99909 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.39□□□□□ -1.55
SSX3Q99909 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX3Q99909 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SSX3Q99909 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SSX3Q99909 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX3Q99909 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
SSX3Q99909 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SSX3Q99909 OR2M1P-201ENST00000318104 951 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SSX3Q99909 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.39□□□□□ -1.55
SSX3Q99909 SNORA70.3-201ENST00000365075 132 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.39□□□□□ -1.55
SSX3Q99909 AC106901.1-201ENST00000425086 698 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX3Q99909 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.39□□□□□ -1.55
SSX3Q99909 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX3Q99909 RN7SL836P-201ENST00000476140 296 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 NPM1P28-201ENST00000492269 840 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 AC097486.1-201ENST00000515331 210 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 NPM1P52-201ENST00000518264 846 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX3Q99909 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.39□□□□□ -1.55
SSX3Q99909 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX3Q99909 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX3Q99909 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SSX3Q99909 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX3Q99909 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.39□□□□□ -1.55
SSX3Q99909 MTATP6P25-201ENST00000574491 261 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 TXNP4-201ENST00000575018 310 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX3Q99909 RPL29P33-201ENST00000587474 316 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX3Q99909 AL359704.2-201ENST00000604335 521 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 AC019257.2-201ENST00000605539 497 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 OR51C1P-201ENST00000608504 942 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX3Q99909 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX3Q99909 MIR6889-201ENST00000613185 59 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
SSX3Q99909 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 RAB28P4-201ENST00000622233 665 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 MTCO1P1-201ENST00000624263 1081 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SSX3Q99909 BCORP1-203ENST00000513194 5093 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX3Q99909 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.39□□□□□ -1.55
SSX3Q99909 SAMM50P1-201ENST00000455403 1399 ntBASIC5.39□□□□□ -1.55
SSX3Q99909 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX3Q99909 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SSX3Q99909 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX3Q99909 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX3Q99909 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms