Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 PABPC1P8-201ENST00000452851 2086 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 PRUNEP1-201ENST00000425846 705 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AC013701.1-201ENST00000522657 465 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AC018558.5-201ENST00000565840 952 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AC087283.1-201ENST00000604029 1074 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AC141002.1-201ENST00000607025 279 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AL161637.1-201ENST00000622380 412 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AC068870.1-201ENST00000563737 2455 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 HDAC1P2-201ENST00000453661 1398 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 CASC19-221ENST00000641309 1382 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 AC132825.1-201ENST00000463573 2247 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 PANDAR-201ENST00000629595 1506 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 GLULP6-201ENST00000399502 913 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 AL713922.1-201ENST00000416477 747 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 NPM1P27-201ENST00000502784 830 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 HSPE1P2-201ENST00000554777 306 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 FBN2-208ENST00000619499 10154 ntTSL 5 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 ICK-202ENST00000356971 6227 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 MIR433-201ENST00000384837 93 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 DUTP4-201ENST00000424782 475 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 AC044797.1-201ENST00000445744 679 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 AC091180.1-201ENST00000462104 372 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 RN7SL481P-201ENST00000477764 299 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 DCN-209ENST00000546745 1026 ntTSL 3 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 GLRXP2-201ENST00000555594 321 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 AC132068.1-201ENST00000623805 459 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 RN7SKP28-201ENST00000364770 305 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 RPS18P6-201ENST00000476880 458 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 RN7SKP21-201ENST00000516503 220 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 AC034205.1-201ENST00000520621 638 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 NRBF2P4-201ENST00000520874 850 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 AC015720.2-201ENST00000567709 334 ntBASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.88□□□□□ -1.63
CSMD1Q96PZ7 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 RN7SL165P-201ENST00000477476 291 ntBASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 AC009163.6-201ENST00000612367 342 ntBASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 COL4A5-201ENST00000328300 6483 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 COL4A5-202ENST00000361603 6469 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms