Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 U1.31-201ENST00000620022 160 ntBASIC5.71□□□□□ -1.5
PTP4A1Q93096 AC006840.1-201ENST00000623069 542 ntBASIC5.71□□□□□ -1.5
PTP4A1Q93096 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PTP4A1Q93096 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PTP4A1Q93096 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.71□□□□□ -1.5
PTP4A1Q93096 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTP4A1Q93096 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTP4A1Q93096 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.71□□□□□ -1.5
PTP4A1Q93096 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTP4A1Q93096 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTP4A1Q93096 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTP4A1Q93096 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 SHQ1P1-201ENST00000437111 1544 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTP4A1Q93096 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTP4A1Q93096 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC092634.1-201ENST00000366505 199 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC240504.1-201ENST00000395709 845 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 AL353133.1-201ENST00000407695 401 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 RN7SKP129-201ENST00000410288 299 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 RANP6-201ENST00000413691 644 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTP4A1Q93096 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 AJ239321.1-201ENST00000424255 564 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 AL589794.1-201ENST00000424971 390 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 RPL5P2-201ENST00000429598 854 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 AL356390.1-201ENST00000455684 397 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 AKR1D1P1-201ENST00000457236 936 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC114728.1-201ENST00000488289 483 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTP4A1Q93096 AK4P6-201ENST00000505168 528 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC020915.5-201ENST00000596836 964 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC012175.1-201ENST00000603755 531 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC114477.1-201ENST00000605097 605 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 U91328.4-201ENST00000608919 517 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 RAB28P4-201ENST00000622233 665 ntBASIC5.7□□□□□ -1.5
PTP4A1Q93096 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTP4A1Q93096 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.7□□□□□ -1.5
PTP4A1Q93096 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTP4A1Q93096 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTP4A1Q93096 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTP4A1Q93096 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTP4A1Q93096 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTP4A1Q93096 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTP4A1Q93096 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC003973.3-201ENST00000624863 2822 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC010132.2-201ENST00000295493 1043 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 OR7A2P-201ENST00000304105 930 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC104297.1-201ENST00000393779 870 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 HMGB3P7-201ENST00000400214 611 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 RPL12P23-201ENST00000405880 490 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 RNA5SP155-201ENST00000411154 129 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 RPS26P38-201ENST00000414476 348 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC009506.2-201ENST00000420635 840 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 CDC42P6-201ENST00000421246 576 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 MTND4LP13-201ENST00000425022 298 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 OR6R1P-201ENST00000431838 940 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 NPM1P9-201ENST00000453156 844 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC022730.1-201ENST00000473114 568 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 RN7SL790P-201ENST00000474043 298 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 OR9A1P-202ENST00000484361 945 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 RPL5P33-201ENST00000487833 905 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC090058.1-201ENST00000498788 435 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC009567.2-201ENST00000502989 349 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 PSMA2P2-201ENST00000504319 686 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC131935.1-201ENST00000524621 333 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms