Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AL136520.1-202ENST00000555494 763 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AC027281.1-201ENST00000574178 758 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AC020978.7-201ENST00000575953 1187 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 MTND2P13-201ENST00000577438 1039 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AC100767.2-201ENST00000604840 693 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AL512652.1-201ENST00000619006 500 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 OR1N1-202ENST00000619659 939 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AC012653.2-201ENST00000621880 420 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AC091305.2-201ENST00000624049 1576 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 MROH3P-201ENST00000435735 2676 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AC074141.1-201ENST00000588129 2995 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AC087565.3-202ENST00000642085 1603 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AC018717.1-201ENST00000457712 1505 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 SUGT1P2-201ENST00000379452 992 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 RNU11-6P-201ENST00000391127 133 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AC008753.1-201ENST00000423096 284 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AL691517.1-201ENST00000440833 1235 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 RPL34P33-201ENST00000486062 334 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 IGHV3-57-201ENST00000520143 280 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AC013731.1-201ENST00000604340 883 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AC129915.3-201ENST00000634128 948 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 AL596244.1-201ENST00000567068 3779 ntBASIC6.37□□□□□ -1.39
HMGB4Q8WW32 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
HMGB4Q8WW32 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 TMEM75-201ENST00000624314 2165 ntBASIC6.36□□□□□ -1.39
HMGB4Q8WW32 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 MIR640-201ENST00000385086 96 ntBASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AL031985.1-201ENST00000392713 418 ntBASIC6.36□□□□□ -1.39
HMGB4Q8WW32 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 RN7SKP206-201ENST00000410823 293 ntBASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AC130360.1-201ENST00000425489 1117 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms