Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CYCSP38-201ENST00000559840 322 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 AC007346.1-201ENST00000569208 867 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 AC141002.1-201ENST00000607025 279 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 AP005431.1-201ENST00000618479 319 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 MIR6730-201ENST00000622213 67 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 AC034229.2-201ENST00000566945 2508 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 AC016583.1-201ENST00000624221 2431 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 RBMY1HP-201ENST00000382759 1389 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 AC022164.1-201ENST00000568767 2673 ntBASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM3Q8TF72 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 RNA5SP477-201ENST00000362639 119 ntBASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AL096711.1-201ENST00000404780 554 ntBASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 SUMO2P10-201ENST00000452006 288 ntBASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AC100767.2-201ENST00000604840 693 ntBASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AC092944.2-201ENST00000605443 889 ntBASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AC211433.2-201ENST00000608433 387 ntBASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AC078880.4-201ENST00000617627 1749 ntBASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AL121835.1-201ENST00000404250 354 ntBASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 RNA5SP178-201ENST00000410380 128 ntBASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 RPL7L1P3-201ENST00000455249 689 ntBASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 ACA64.4-201ENST00000459070 127 ntBASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AC010343.2-201ENST00000510162 224 ntBASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 MRPS21P8-201ENST00000569196 235 ntBASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AP001823.1-201ENST00000604056 1003 ntBASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.2□□□□□ -1.42
SHROOM3Q8TF72 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 AC068769.1-201ENST00000474767 2426 ntBASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 SNORA51.9-201ENST00000384295 124 ntBASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 MIR130B-202ENST00000385018 82 ntBASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 RN7SKP216-201ENST00000411050 312 ntBASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 AC017035.1-201ENST00000411999 1115 ntBASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 AC245884.2-201ENST00000426257 404 ntBASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 RBBP4P1-201ENST00000502424 1276 ntBASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms