Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 PCBP2P1-201ENST00000437262 977 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 SEPT14P12-201ENST00000442280 560 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 RPL31P15-201ENST00000449770 338 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 AC020916.2-201ENST00000591242 360 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 AC013731.1-201ENST00000604340 883 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 CCT5-215ENST00000625723 135 ntTSL 5 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 OR8G3P-202ENST00000641572 1255 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 PABPC1P8-201ENST00000452851 2086 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 AC091390.2-201ENST00000432573 374 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 MORF4L1P5-201ENST00000433352 961 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 IGLV3-6-201ENST00000523937 250 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 AL352984.2-201ENST00000611153 546 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 MIR4302-201ENST00000638058 60 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 AC092821.3-202ENST00000641304 2767 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 OR7E91P-202ENST00000642062 1198 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 RN7SKP108-201ENST00000411367 328 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 FTH1P10-202ENST00000430907 550 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 VN1R110P-201ENST00000438988 971 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 DNAJC19P5-201ENST00000443295 316 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 AC095057.1-201ENST00000507583 168 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 AC108103.1-201ENST00000511286 446 ntBASIC1.88□□□□□ -2.11
SYNE1Q8NF91 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SYNE1Q8NF91 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC106872.5-201ENST00000508856 1416 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 RN7SKP144-201ENST00000411108 279 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AL157884.1-201ENST00000424561 454 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AL512593.1-201ENST00000444758 779 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 IGLV3-30-201ENST00000524362 298 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC023968.1-201ENST00000560719 475 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 MIR3135A-201ENST00000578460 77 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC127024.6-201ENST00000621598 424 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 WDR75-207ENST00000631047 270 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 OR52B5P-204ENST00000641744 3467 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 RN7SL834P-201ENST00000461450 286 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 TSACC-207ENST00000470342 601 ntTSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms