Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC005332.4-201ENST00000592752 579 ntBASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AL137000.1-201ENST00000610528 1244 ntBASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AC015819.1-201ENST00000613588 663 ntBASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 MIR6503-201ENST00000622884 86 ntBASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 OR56A4-201ENST00000330728 1209 ntBASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 SNORA5.1-201ENST00000384275 131 ntBASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 MIR621-201ENST00000384919 96 ntBASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AC026310.1-201ENST00000396004 378 ntBASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AL353133.1-201ENST00000407695 401 ntBASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 RN7SKP38-201ENST00000410782 309 ntBASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 RN7SKP166-201ENST00000410812 305 ntBASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AC245096.1-201ENST00000413104 546 ntBASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AC005519.1-201ENST00000554490 601 ntBASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AL136097.3-201ENST00000611097 505 ntBASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AL161756.3-201ENST00000641216 2071 ntBASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 AC010132.4-201ENST00000569883 1368 ntBASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CCDC112Q8NEF3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 AC013268.3-201ENST00000262716 2324 ntBASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 RNA5SP155-201ENST00000411154 129 ntBASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 RPL24P2-201ENST00000421023 475 ntBASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 RPS27AP6-201ENST00000427962 448 ntBASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 BX119904.3-201ENST00000428194 957 ntBASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 AL590399.4-201ENST00000436561 601 ntBASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 RN7SL643P-201ENST00000471845 291 ntBASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 RPL23AP40-201ENST00000487630 390 ntBASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 AC111000.6-201ENST00000514471 709 ntBASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 AC138517.1-201ENST00000515724 568 ntBASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 AL133399.1-201ENST00000527476 298 ntBASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 RPL3P13-201ENST00000550415 216 ntBASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 OR4C49P-201ENST00000563891 900 ntBASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 AC006115.2-201ENST00000596823 202 ntBASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 MIR6780B-201ENST00000610307 79 ntBASIC6.67□□□□□ -1.34
CCDC112Q8NEF3 AC027559.1-201ENST00000636288 271 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms