Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 OFD1P18Y-201ENST00000420889 959 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AL139413.1-201ENST00000421309 217 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 WRBP1-201ENST00000423352 334 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 LINC01363-201ENST00000426709 971 ntTSL 5 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC114755.4-201ENST00000439114 443 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AL831737.1-201ENST00000441288 271 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC004865.1-201ENST00000442276 1003 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 TPT1P14-201ENST00000448018 505 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 NFU1P2-201ENST00000448700 469 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 TUBB3P2-201ENST00000480063 232 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC092989.1-201ENST00000481235 277 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 RN7SL28P-201ENST00000488836 298 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 RPS26P24-201ENST00000497656 331 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC093824.1-201ENST00000508796 343 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC008868.1-201ENST00000509786 737 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 JRKL-AS1-201ENST00000511243 426 ntTSL 2 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 GNPDA1-212ENST00000513454 980 ntTSL 5 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 MAST4-IT1-201ENST00000514241 658 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 PAICSP4-201ENST00000517543 1253 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 DDIT3-205ENST00000552740 951 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 ULK4P3-201ENST00000563895 440 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC090213.1-201ENST00000586841 546 ntTSL 4 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 MKNK2-211ENST00000591142 875 ntTSL 2 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC233702.11-201ENST00000598588 333 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AP000894.4-201ENST00000610185 483 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC009053.4-201ENST00000614366 108 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC002553.4-201ENST00000616896 331 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AL157359.3-201ENST00000623771 217 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AP000577.1-201ENST00000624366 878 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC087645.3-201ENST00000624708 587 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AL121785.1-201ENST00000624745 708 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 LINC00561-201ENST00000565815 2738 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC011592.1-201ENST00000624647 3634 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC036108.4-201ENST00000611654 2516 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AL354685.2-201ENST00000448218 1447 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC114324.1-201ENST00000504077 3152 ntBASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 INTS4-211ENST00000535943 1382 ntTSL 5 BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
DEPDC4Q8N2C3 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AF228730.7-203ENST00000641436 1804 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 COL6A4P1-202ENST00000487147 4317 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 MIR135B-201ENST00000362189 97 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 MTIF3-202ENST00000381120 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 HMGB3P23-201ENST00000414981 585 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 RPL7P30-201ENST00000420888 709 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AC062016.2-201ENST00000420950 676 ntBASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC7.57□□□□□ -1.2
DEPDC4Q8N2C3 AL513175.1-201ENST00000431492 780 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 319.8 ms