Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL137067.2-201ENST00000621202 131 ntBASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFWD3Q6PCD5 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 AC119674.1-202ENST00000641333 1860 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 SNORA11.3-201ENST00000408471 128 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 KCTD9P1-201ENST00000430462 1167 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 ATP5LP2-201ENST00000440646 311 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 AL451063.1-201ENST00000450164 1133 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 RPS27AP3-201ENST00000453803 454 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 AC023194.2-201ENST00000465398 406 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 RPA2P3-201ENST00000533268 770 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 AC079905.1-201ENST00000549280 475 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 AC008507.3-201ENST00000585753 472 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 NPIPB1P-202ENST00000588786 828 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 SNORA11.6-201ENST00000619030 128 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 AC008627.1-201ENST00000517511 1704 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 AC079753.1-201ENST00000623243 3868 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 PSG10P-201ENST00000501199 1500 ntBASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.35□□□□□ -1.39
RFWD3Q6PCD5 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 HDAC1P2-201ENST00000453661 1398 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 AL355834.1-201ENST00000556602 3965 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 RNA5SP375-201ENST00000362975 119 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 RN7SKP275-201ENST00000364626 301 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 MIR1282-201ENST00000408865 101 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 AC092651.1-201ENST00000426110 312 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 DNAJA1P5-201ENST00000440278 943 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 SEPT14P12-201ENST00000442280 560 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 ZNF619P1-201ENST00000446539 752 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 PPIAP27-201ENST00000453800 265 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 snoU13.29-201ENST00000459370 104 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 RN7SL221P-201ENST00000466190 281 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 NDUFA5P5-201ENST00000468361 342 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 RNA5SP340-201ENST00000517132 107 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 AC027369.2-201ENST00000528030 440 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 AC005726.4-201ENST00000582858 458 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 AC073488.3-201ENST00000631611 778 ntBASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RFWD3Q6PCD5 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
RFWD3Q6PCD5 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
RFWD3Q6PCD5 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
RFWD3Q6PCD5 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
RFWD3Q6PCD5 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms