Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 KYNUP3-201ENST00000574386 1341 ntBASIC5.87□□□□□ -1.47
RIF1Q5UIP0 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 AC131971.1-201ENST00000332881 1482 ntBASIC5.87□□□□□ -1.47
RIF1Q5UIP0 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 AL354868.1-201ENST00000417077 482 ntBASIC5.87□□□□□ -1.47
RIF1Q5UIP0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC5.87□□□□□ -1.47
RIF1Q5UIP0 AL354718.1-201ENST00000619764 589 ntBASIC5.87□□□□□ -1.47
RIF1Q5UIP0 AC131009.3-201ENST00000621809 287 ntBASIC5.87□□□□□ -1.47
RIF1Q5UIP0 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.87□□□□□ -1.47
RIF1Q5UIP0 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 RNA5SP87-201ENST00000384155 118 ntBASIC5.87□□□□□ -1.47
RIF1Q5UIP0 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 CYCSP12-201ENST00000437729 300 ntBASIC5.87□□□□□ -1.47
RIF1Q5UIP0 FTLP8-201ENST00000446770 267 ntBASIC5.87□□□□□ -1.47
RIF1Q5UIP0 GNL2P1-201ENST00000451274 2190 ntBASIC5.87□□□□□ -1.47
RIF1Q5UIP0 RPS3AP41-201ENST00000462701 778 ntBASIC5.87□□□□□ -1.47
RIF1Q5UIP0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 AC007842.1-201ENST00000597336 2039 ntBASIC5.87□□□□□ -1.47
RIF1Q5UIP0 AC063977.5-201ENST00000601044 974 ntBASIC5.87□□□□□ -1.47
RIF1Q5UIP0 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
RIF1Q5UIP0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AC006213.6-201ENST00000623722 4179 ntBASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AL589647.1-201ENST00000402485 466 ntBASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 Z68868.1-201ENST00000429048 544 ntBASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 RN7SL269P-201ENST00000467795 305 ntBASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AC068587.1-201ENST00000483613 781 ntBASIC5.86□□□□□ -1.47
RIF1Q5UIP0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 IGBP1P1-201ENST00000554337 1009 ntBASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 MR1-205ENST00000434571 7479 ntTSL 5 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 HMGA1P8-201ENST00000414130 321 ntBASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AC011753.3-201ENST00000443436 406 ntBASIC5.86□□□□□ -1.47
RIF1Q5UIP0 OR7E157P-201ENST00000494376 911 ntBASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 IGHV3-57-201ENST00000520143 280 ntBASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AC092865.1-201ENST00000544395 1023 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms