Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
PTCH1Q13635 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PTCH1Q13635 RN7SKP29-201ENST00000410957 272 ntBASIC8.3□□□□□ -1.08
PTCH1Q13635 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC8.3□□□□□ -1.08
PTCH1Q13635 TNPO1P1-201ENST00000423641 1138 ntBASIC8.3□□□□□ -1.08
PTCH1Q13635 AC092017.2-201ENST00000427600 362 ntBASIC8.3□□□□□ -1.08
PTCH1Q13635 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC8.3□□□□□ -1.08
PTCH1Q13635 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC8.3□□□□□ -1.08
PTCH1Q13635 AC073850.1-201ENST00000449243 255 ntBASIC8.3□□□□□ -1.08
PTCH1Q13635 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC8.3□□□□□ -1.08
PTCH1Q13635 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PTCH1Q13635 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC8.3□□□□□ -1.08
PTCH1Q13635 SNORA43.3-201ENST00000517240 103 ntBASIC8.3□□□□□ -1.08
PTCH1Q13635 OR7E158P-201ENST00000524483 910 ntBASIC8.3□□□□□ -1.08
PTCH1Q13635 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.3□□□□□ -1.08
PTCH1Q13635 HMGB1P42-201ENST00000532126 553 ntBASIC8.3□□□□□ -1.08
PTCH1Q13635 ASB8-202ENST00000535055 657 ntTSL 2 BASIC8.3□□□□□ -1.08
PTCH1Q13635 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC8.3□□□□□ -1.08
PTCH1Q13635 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC8.3□□□□□ -1.08
PTCH1Q13635 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC8.3□□□□□ -1.08
PTCH1Q13635 AC119674.1-217ENST00000641942 1086 ntBASIC8.3□□□□□ -1.08
PTCH1Q13635 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PTCH1Q13635 GDA-209ENST00000545168 5362 ntTSL 2 BASIC8.3□□□□□ -1.08
PTCH1Q13635 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
PTCH1Q13635 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PTCH1Q13635 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PTCH1Q13635 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
PTCH1Q13635 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
PTCH1Q13635 SELE-203ENST00000367775 3389 ntTSL 5 BASIC8.3□□□□□ -1.08
PTCH1Q13635 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
PTCH1Q13635 IARS-213ENST00000627121 4587 ntTSL 5 BASIC8.3□□□□□ -1.08
PTCH1Q13635 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
PTCH1Q13635 PARP4P2-201ENST00000446672 3326 ntBASIC8.3□□□□□ -1.08
PTCH1Q13635 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PTCH1Q13635 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PTCH1Q13635 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC8.3□□□□□ -1.08
PTCH1Q13635 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC8.3□□□□□ -1.08
PTCH1Q13635 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PTCH1Q13635 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
PTCH1Q13635 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PTCH1Q13635 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PTCH1Q13635 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC8.3□□□□□ -1.08
PTCH1Q13635 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
PTCH1Q13635 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PTCH1Q13635 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC8.29□□□□□ -1.08
PTCH1Q13635 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PTCH1Q13635 AL391262.1-201ENST00000556558 1992 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
PTCH1Q13635 AC103591.2-201ENST00000265259 766 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 RN7SKP125-201ENST00000410481 302 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 RN7SKP166-201ENST00000410812 305 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 EEF1A1P29-201ENST00000416082 1096 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 AC091685.2-201ENST00000454924 864 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC8.29□□□□□ -1.08
PTCH1Q13635 MRPS16P1-201ENST00000523462 412 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC8.29□□□□□ -1.08
PTCH1Q13635 TXNP4-201ENST00000575018 310 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC8.29□□□□□ -1.08
PTCH1Q13635 AL021368.3-201ENST00000607119 578 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 AL139099.4-201ENST00000614802 114 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 AC068870.2-201ENST00000620635 389 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PTCH1Q13635 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
PTCH1Q13635 AC005034.3-201ENST00000604845 1747 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC8.29□□□□□ -1.08
PTCH1Q13635 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
PTCH1Q13635 AC011504.1-201ENST00000623331 4103 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC8.29□□□□□ -1.08
PTCH1Q13635 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PTCH1Q13635 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PTCH1Q13635 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
PTCH1Q13635 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC8.29□□□□□ -1.08
PTCH1Q13635 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
PTCH1Q13635 PARP4P1-201ENST00000435945 2337 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC8.29□□□□□ -1.08
PTCH1Q13635 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
PTCH1Q13635 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PTCH1Q13635 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PTCH1Q13635 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PTCH1Q13635 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC8.29□□□□□ -1.08
PTCH1Q13635 OR6E1P-201ENST00000414424 923 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC8.29□□□□□ -1.08
PTCH1Q13635 RPS4XP5-201ENST00000419038 768 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 AC099677.3-201ENST00000427081 395 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 AL451136.1-201ENST00000435399 325 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 CNOT7P2-201ENST00000441051 832 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 AL450996.1-201ENST00000445574 1202 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 FRG2FP-204ENST00000453982 852 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 AC073594.1-201ENST00000462065 364 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC8.29□□□□□ -1.08
PTCH1Q13635 AC109481.1-201ENST00000509173 282 ntBASIC8.29□□□□□ -1.08
PTCH1Q13635 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PTCH1Q13635 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC8.29□□□□□ -1.08
PTCH1Q13635 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC8.29□□□□□ -1.08
PTCH1Q13635 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PTCH1Q13635 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
PTCH1Q13635 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC8.28□□□□□ -1.08
PTCH1Q13635 Z82209.2-201ENST00000623410 2012 ntBASIC8.28□□□□□ -1.08
PTCH1Q13635 HYDIN2-203ENST00000614586 13885 ntBASIC8.28□□□□□ -1.08
PTCH1Q13635 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms