Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AC027796.1-201ENST00000575593 512 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 MIR3189-201ENST00000578735 73 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AL008582.1-201ENST00000609612 442 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 MIR6849-201ENST00000618543 69 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AC068213.1-201ENST00000625124 226 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AC003992.1-201ENST00000635364 557 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 OR7E91P-202ENST00000642062 1198 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 ICE2P1-201ENST00000512800 1849 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AC096921.2-201ENST00000561507 1916 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 HSPA8P14-201ENST00000552265 1805 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AL603750.1-201ENST00000624216 1717 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 SNORD1C-201ENST00000363315 78 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AL445238.1-204ENST00000400311 463 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 ZNF37CP-201ENST00000406795 241 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AL033519.1-201ENST00000407266 307 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 GPN3P1-201ENST00000423883 535 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 BX276092.6-201ENST00000430476 250 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 RPS27AP3-201ENST00000453803 454 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AL034369.1-201ENST00000453808 477 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 RPL31P11-202ENST00000454082 372 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 BX276092.8-201ENST00000455722 250 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 RANP2-201ENST00000456833 229 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 RN7SL790P-201ENST00000474043 298 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AL035690.1-201ENST00000490892 383 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AC122714.1-201ENST00000502510 459 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AC093664.1-201ENST00000511779 289 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 RNA5SP418-201ENST00000515951 117 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 RN7SKP64-201ENST00000517206 328 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AC131935.1-201ENST00000524621 333 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AC009729.1-201ENST00000548873 1133 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AC009852.2-201ENST00000567898 485 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 MIR4732-201ENST00000581873 76 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AC024267.2-201ENST00000582737 417 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AL589863.1-201ENST00000595383 631 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 MIR6070-201ENST00000613967 103 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AC069234.4-201ENST00000621276 412 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 AP001541.1-201ENST00000623322 1904 ntBASIC4.7□□□□□ -1.66
HIST1H1AQ02539 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.7□□□□□ -1.66
HIST1H1AQ02539 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms