Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC239367.3-201ENST00000428996 814 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 HIGD1AP4-201ENST00000430194 280 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.04□□□□□ -1.44
CLRN1P58418 RPS27P5-201ENST00000444247 244 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.04□□□□□ -1.44
CLRN1P58418 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.04□□□□□ -1.44
CLRN1P58418 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.04□□□□□ -1.44
CLRN1P58418 AC008280.2-201ENST00000455473 307 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC6.04□□□□□ -1.44
CLRN1P58418 RN7SL390P-201ENST00000470634 284 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 AC117395.1-201ENST00000487390 403 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 RPS12P31-201ENST00000491419 398 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 RPL23AP80-201ENST00000495605 424 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.04□□□□□ -1.44
CLRN1P58418 GOLGA5P1-201ENST00000507317 980 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.04□□□□□ -1.44
CLRN1P58418 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.04□□□□□ -1.44
CLRN1P58418 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.04□□□□□ -1.44
CLRN1P58418 PPIAP6-201ENST00000557078 499 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.04□□□□□ -1.44
CLRN1P58418 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.04□□□□□ -1.44
CLRN1P58418 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.04□□□□□ -1.44
CLRN1P58418 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC6.04□□□□□ -1.44
CLRN1P58418 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.04□□□□□ -1.44
CLRN1P58418 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CLRN1P58418 AC093524.1-201ENST00000564266 1094 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 AC021483.2-201ENST00000567415 758 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.04□□□□□ -1.44
CLRN1P58418 AC091932.1-201ENST00000569381 427 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 MRPS21P9-201ENST00000571150 257 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.04□□□□□ -1.44
CLRN1P58418 CCDC58P3-201ENST00000590792 430 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.04□□□□□ -1.44
CLRN1P58418 AL022161.1-201ENST00000604390 213 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 AC107952.2-201ENST00000606048 486 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 AC097641.3-201ENST00000613523 464 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 AC073862.4-201ENST00000622982 854 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 AL512506.2-201ENST00000624472 458 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.04□□□□□ -1.44
CLRN1P58418 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.04□□□□□ -1.44
CLRN1P58418 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.04□□□□□ -1.44
CLRN1P58418 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CLRN1P58418 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 AC119674.1-202ENST00000641333 1860 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.04□□□□□ -1.44
CLRN1P58418 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 MAPK10-344ENST00000641718 3746 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.04□□□□□ -1.44
CLRN1P58418 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 Z97989.1-201ENST00000531702 2421 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLRN1P58418 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLRN1P58418 Z83820.1-201ENST00000456978 1499 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 MFSD8-213ENST00000641134 1327 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CLRN1P58418 AC079949.2-201ENST00000617117 2933 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLRN1P58418 AC007382.1-201ENST00000624376 2618 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.03□□□□□ -1.44
CLRN1P58418 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CLRN1P58418 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.03□□□□□ -1.44
CLRN1P58418 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CLRN1P58418 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.03□□□□□ -1.44
CLRN1P58418 AC122713.2-201ENST00000624942 3335 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.03□□□□□ -1.44
CLRN1P58418 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLRN1P58418 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLRN1P58418 RNA5SP429-201ENST00000363688 109 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 RN7SKP189-201ENST00000365042 330 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.03□□□□□ -1.44
CLRN1P58418 MIR99A-201ENST00000384906 81 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CLRN1P58418 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CLRN1P58418 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLRN1P58418 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLRN1P58418 AL096711.1-201ENST00000404780 554 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 NFU1P1-201ENST00000413128 774 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 MICG-208ENST00000416822 132 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 AL161742.1-201ENST00000418154 584 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 AC245452.2-201ENST00000435222 392 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.03□□□□□ -1.44
CLRN1P58418 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.03□□□□□ -1.44
CLRN1P58418 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CLRN1P58418 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 ZNF886P-201ENST00000450781 723 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.03□□□□□ -1.44
CLRN1P58418 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms