Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL133399.1-201ENST00000527476 298 ntBASIC5.8□□□□□ -1.48
CDH12P55289 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH12P55289 AC023968.1-201ENST00000560719 475 ntBASIC5.8□□□□□ -1.48
CDH12P55289 AC068408.1-201ENST00000577406 1144 ntBASIC5.8□□□□□ -1.48
CDH12P55289 SYPL1P2-201ENST00000582878 727 ntBASIC5.8□□□□□ -1.48
CDH12P55289 AC027229.1-201ENST00000583887 253 ntBASIC5.8□□□□□ -1.48
CDH12P55289 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
CDH12P55289 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.8□□□□□ -1.48
CDH12P55289 AC027334.1-201ENST00000603257 310 ntBASIC5.8□□□□□ -1.48
CDH12P55289 AC006924.1-201ENST00000610750 559 ntBASIC5.8□□□□□ -1.48
CDH12P55289 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CDH12P55289 OR7E91P-202ENST00000642062 1198 ntBASIC5.8□□□□□ -1.48
CDH12P55289 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH12P55289 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH12P55289 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH12P55289 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH12P55289 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CDH12P55289 AP002512.4-202ENST00000641599 4530 ntBASIC5.8□□□□□ -1.48
CDH12P55289 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH12P55289 HDAC1P2-201ENST00000453661 1398 ntBASIC5.8□□□□□ -1.48
CDH12P55289 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH12P55289 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 SMG1P5-202ENST00000529428 4219 ntBASIC5.79□□□□□ -1.48
CDH12P55289 SMG1P2-201ENST00000566127 4221 ntBASIC5.79□□□□□ -1.48
CDH12P55289 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 AP001002.1-201ENST00000625148 1513 ntBASIC5.79□□□□□ -1.48
CDH12P55289 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH12P55289 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CDH12P55289 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH12P55289 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH12P55289 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
CDH12P55289 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CDH12P55289 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH12P55289 AL445238.1-204ENST00000400311 463 ntBASIC5.79□□□□□ -1.48
CDH12P55289 RN7SKP221-201ENST00000410420 301 ntBASIC5.79□□□□□ -1.48
CDH12P55289 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CDH12P55289 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 UBE2V1P6-201ENST00000430840 422 ntBASIC5.79□□□□□ -1.48
CDH12P55289 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 MRPS33P4-201ENST00000434892 317 ntBASIC5.79□□□□□ -1.48
CDH12P55289 MRPS21P3-201ENST00000436696 262 ntBASIC5.79□□□□□ -1.48
CDH12P55289 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH12P55289 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH12P55289 MTND5P8-201ENST00000449817 1083 ntBASIC5.79□□□□□ -1.48
CDH12P55289 AL451063.1-201ENST00000450164 1133 ntBASIC5.79□□□□□ -1.48
CDH12P55289 AC112187.1-201ENST00000455837 479 ntBASIC5.79□□□□□ -1.48
CDH12P55289 RNU7-157P-201ENST00000459600 66 ntBASIC5.79□□□□□ -1.48
CDH12P55289 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH12P55289 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH12P55289 AC018645.1-201ENST00000505003 109 ntBASIC5.79□□□□□ -1.48
CDH12P55289 AC093664.1-201ENST00000511779 289 ntBASIC5.79□□□□□ -1.48
CDH12P55289 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH12P55289 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH12P55289 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH12P55289 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
CDH12P55289 OR9G2P-201ENST00000533326 880 ntBASIC5.79□□□□□ -1.48
CDH12P55289 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 AC134349.2-201ENST00000535136 910 ntBASIC5.79□□□□□ -1.48
CDH12P55289 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH12P55289 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH12P55289 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CDH12P55289 RPL3P13-201ENST00000550415 216 ntBASIC5.79□□□□□ -1.48
CDH12P55289 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.79□□□□□ -1.48
CDH12P55289 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH12P55289 RN7SL475P-201ENST00000583379 298 ntBASIC5.79□□□□□ -1.48
CDH12P55289 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH12P55289 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH12P55289 AC069234.4-201ENST00000621276 412 ntBASIC5.79□□□□□ -1.48
CDH12P55289 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH12P55289 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH12P55289 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
CDH12P55289 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH12P55289 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CDH12P55289 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CDH12P55289 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH12P55289 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH12P55289 OR2W4P-201ENST00000406496 926 ntBASIC5.78□□□□□ -1.48
CDH12P55289 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms