Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDX1P52945 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.03□□□□□ -1.44
PDX1P52945 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.03□□□□□ -1.44
PDX1P52945 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDX1P52945 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PDX1P52945 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PDX1P52945 RNA5SP284-201ENST00000384547 118 ntBASIC6.03□□□□□ -1.44
PDX1P52945 AC087752.1-201ENST00000391360 558 ntBASIC6.03□□□□□ -1.44
PDX1P52945 RN7SKP229-201ENST00000410465 302 ntBASIC6.03□□□□□ -1.44
PDX1P52945 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.03□□□□□ -1.44
PDX1P52945 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.03□□□□□ -1.44
PDX1P52945 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.03□□□□□ -1.44
PDX1P52945 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDX1P52945 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.03□□□□□ -1.44
PDX1P52945 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.03□□□□□ -1.44
PDX1P52945 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.03□□□□□ -1.44
PDX1P52945 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.03□□□□□ -1.44
PDX1P52945 NXT1P1-201ENST00000458481 316 ntBASIC6.03□□□□□ -1.44
PDX1P52945 PPIAP19-201ENST00000486414 492 ntBASIC6.03□□□□□ -1.44
PDX1P52945 CR383658.1-201ENST00000514609 734 ntBASIC6.03□□□□□ -1.44
PDX1P52945 Y_RNA.667-201ENST00000516212 107 ntBASIC6.03□□□□□ -1.44
PDX1P52945 SCARNA21.2-201ENST00000516600 166 ntBASIC6.03□□□□□ -1.44
PDX1P52945 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.03□□□□□ -1.44
PDX1P52945 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.03□□□□□ -1.44
PDX1P52945 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.03□□□□□ -1.44
PDX1P52945 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.03□□□□□ -1.44
PDX1P52945 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.03□□□□□ -1.44
PDX1P52945 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.03□□□□□ -1.44
PDX1P52945 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.03□□□□□ -1.44
PDX1P52945 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.03□□□□□ -1.44
PDX1P52945 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.03□□□□□ -1.44
PDX1P52945 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.03□□□□□ -1.44
PDX1P52945 AC092681.3-201ENST00000609463 678 ntBASIC6.03□□□□□ -1.44
PDX1P52945 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.03□□□□□ -1.44
PDX1P52945 RFPL4AP6-201ENST00000616792 846 ntBASIC6.03□□□□□ -1.44
PDX1P52945 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.03□□□□□ -1.44
PDX1P52945 MARK2P4-201ENST00000503381 2380 ntBASIC6.03□□□□□ -1.44
PDX1P52945 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.03□□□□□ -1.44
PDX1P52945 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
PDX1P52945 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.03□□□□□ -1.44
PDX1P52945 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.03□□□□□ -1.44
PDX1P52945 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDX1P52945 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDX1P52945 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
PDX1P52945 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
PDX1P52945 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.44
PDX1P52945 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.02□□□□□ -1.44
PDX1P52945 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDX1P52945 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
PDX1P52945 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.02□□□□□ -1.45
PDX1P52945 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.02□□□□□ -1.45
PDX1P52945 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
PDX1P52945 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDX1P52945 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDX1P52945 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDX1P52945 SNORA21-201ENST00000362423 132 ntBASIC6.02□□□□□ -1.45
PDX1P52945 AL451046.1-201ENST00000406097 534 ntBASIC6.02□□□□□ -1.45
PDX1P52945 RN7SKP144-201ENST00000411108 279 ntBASIC6.02□□□□□ -1.45
PDX1P52945 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.02□□□□□ -1.45
PDX1P52945 AL353626.3-201ENST00000413399 657 ntBASIC6.02□□□□□ -1.45
PDX1P52945 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.02□□□□□ -1.45
PDX1P52945 RPL12P12-201ENST00000424633 501 ntBASIC6.02□□□□□ -1.45
PDX1P52945 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.02□□□□□ -1.45
PDX1P52945 AC002553.3-201ENST00000453002 341 ntBASIC6.02□□□□□ -1.45
PDX1P52945 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.02□□□□□ -1.45
PDX1P52945 AP000926.3-201ENST00000497201 299 ntBASIC6.02□□□□□ -1.45
PDX1P52945 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDX1P52945 AC091965.3-201ENST00000506236 208 ntBASIC6.02□□□□□ -1.45
PDX1P52945 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDX1P52945 RNA5SP271-201ENST00000516700 88 ntBASIC6.02□□□□□ -1.45
PDX1P52945 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.02□□□□□ -1.45
PDX1P52945 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDX1P52945 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PDX1P52945 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.02□□□□□ -1.45
PDX1P52945 AC073916.1-201ENST00000545095 130 ntBASIC6.02□□□□□ -1.45
PDX1P52945 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.02□□□□□ -1.45
PDX1P52945 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.02□□□□□ -1.45
PDX1P52945 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.02□□□□□ -1.45
PDX1P52945 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.02□□□□□ -1.45
PDX1P52945 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.02□□□□□ -1.45
PDX1P52945 SETP3-201ENST00000581726 813 ntBASIC6.02□□□□□ -1.45
PDX1P52945 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDX1P52945 NF1P10-201ENST00000613227 742 ntBASIC6.02□□□□□ -1.45
PDX1P52945 AC010998.3-201ENST00000613871 631 ntBASIC6.02□□□□□ -1.45
PDX1P52945 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDX1P52945 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.02□□□□□ -1.45
PDX1P52945 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
PDX1P52945 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PDX1P52945 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDX1P52945 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDX1P52945 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDX1P52945 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDX1P52945 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.01□□□□□ -1.45
PDX1P52945 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDX1P52945 AC011455.2-201ENST00000599320 3336 ntBASIC6.01□□□□□ -1.45
PDX1P52945 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDX1P52945 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.01□□□□□ -1.45
PDX1P52945 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PDX1P52945 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDX1P52945 MTCO1P11-201ENST00000429111 1528 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms