Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.26□□□□□ -1.41
BRCA2P51587 SNORA62-201ENST00000365493 153 ntBASIC6.26□□□□□ -1.41
BRCA2P51587 RNA5SP91-201ENST00000390902 119 ntBASIC6.26□□□□□ -1.41
BRCA2P51587 CYCSP29-201ENST00000533731 318 ntBASIC6.26□□□□□ -1.41
BRCA2P51587 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6.26□□□□□ -1.41
BRCA2P51587 BNIP3P22-201ENST00000593399 556 ntBASIC6.26□□□□□ -1.41
BRCA2P51587 OR52H1-202ENST00000641796 1061 ntBASIC6.26□□□□□ -1.41
BRCA2P51587 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
BRCA2P51587 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
BRCA2P51587 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
BRCA2P51587 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
BRCA2P51587 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
BRCA2P51587 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
BRCA2P51587 PTCHD1-201ENST00000379361 13714 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
BRCA2P51587 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
BRCA2P51587 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
BRCA2P51587 RPS23P7-201ENST00000466210 444 ntBASIC6.26□□□□□ -1.41
BRCA2P51587 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.26□□□□□ -1.41
BRCA2P51587 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
BRCA2P51587 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
BRCA2P51587 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
BRCA2P51587 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
BRCA2P51587 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
BRCA2P51587 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
BRCA2P51587 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
BRCA2P51587 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
BRCA2P51587 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.25□□□□□ -1.41
BRCA2P51587 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
BRCA2P51587 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
BRCA2P51587 AC019050.1-201ENST00000418508 492 ntBASIC6.25□□□□□ -1.41
BRCA2P51587 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.25□□□□□ -1.41
BRCA2P51587 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.25□□□□□ -1.41
BRCA2P51587 RN7SL447P-201ENST00000494711 245 ntBASIC6.25□□□□□ -1.41
BRCA2P51587 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC6.25□□□□□ -1.41
BRCA2P51587 OR7H2P-201ENST00000513483 306 ntBASIC6.25□□□□□ -1.41
BRCA2P51587 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
BRCA2P51587 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.25□□□□□ -1.41
BRCA2P51587 AC139493.1-201ENST00000604368 397 ntBASIC6.25□□□□□ -1.41
BRCA2P51587 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.25□□□□□ -1.41
BRCA2P51587 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC6.25□□□□□ -1.41
BRCA2P51587 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.25□□□□□ -1.41
BRCA2P51587 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 AC006213.6-201ENST00000623722 4179 ntBASIC6.25□□□□□ -1.41
BRCA2P51587 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
BRCA2P51587 MYLK-205ENST00000360772 10027 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
BRCA2P51587 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
BRCA2P51587 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.25□□□□□ -1.41
BRCA2P51587 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 NRAP-203ENST00000369358 5534 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 RNA5SP335-201ENST00000363817 110 ntBASIC6.25□□□□□ -1.41
BRCA2P51587 RNA5SP211-201ENST00000365516 117 ntBASIC6.25□□□□□ -1.41
BRCA2P51587 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.25□□□□□ -1.41
BRCA2P51587 AP002981.1-201ENST00000517692 975 ntBASIC6.25□□□□□ -1.41
BRCA2P51587 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.25□□□□□ -1.41
BRCA2P51587 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.25□□□□□ -1.41
BRCA2P51587 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
BRCA2P51587 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC6.25□□□□□ -1.41
BRCA2P51587 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.25□□□□□ -1.41
BRCA2P51587 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
BRCA2P51587 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 MIR130A-201ENST00000385274 89 ntBASIC6.25□□□□□ -1.41
BRCA2P51587 AL049693.1-201ENST00000402760 611 ntBASIC6.25□□□□□ -1.41
BRCA2P51587 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.25□□□□□ -1.41
BRCA2P51587 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.25□□□□□ -1.41
BRCA2P51587 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.25□□□□□ -1.41
BRCA2P51587 AC095057.1-201ENST00000507583 168 ntBASIC6.25□□□□□ -1.41
BRCA2P51587 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.25□□□□□ -1.41
BRCA2P51587 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.25□□□□□ -1.41
BRCA2P51587 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 MIR5095-201ENST00000578844 88 ntBASIC6.25□□□□□ -1.41
BRCA2P51587 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.25□□□□□ -1.41
BRCA2P51587 AC090527.3-201ENST00000619041 548 ntBASIC6.25□□□□□ -1.41
BRCA2P51587 AC091905.4-201ENST00000623432 202 ntBASIC6.25□□□□□ -1.41
BRCA2P51587 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BRCA2P51587 MIPEPP2-201ENST00000422560 1819 ntBASIC6.24□□□□□ -1.41
BRCA2P51587 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
BRCA2P51587 AC011369.2-201ENST00000624423 1567 ntBASIC6.24□□□□□ -1.41
BRCA2P51587 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BRCA2P51587 ZNF101P1-201ENST00000435701 1720 ntBASIC6.24□□□□□ -1.41
BRCA2P51587 RNU6-398P-201ENST00000384143 109 ntBASIC6.24□□□□□ -1.41
BRCA2P51587 AC004690.1-201ENST00000418216 328 ntBASIC6.24□□□□□ -1.41
BRCA2P51587 RPS27AP7-201ENST00000422792 455 ntBASIC6.24□□□□□ -1.41
BRCA2P51587 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.24□□□□□ -1.41
BRCA2P51587 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.24□□□□□ -1.41
BRCA2P51587 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.24□□□□□ -1.41
BRCA2P51587 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
BRCA2P51587 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BRCA2P51587 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
BRCA2P51587 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BRCA2P51587 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms