Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.6□□□□□ -1.35
SSR1P43307 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.6□□□□□ -1.35
SSR1P43307 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.6□□□□□ -1.35
SSR1P43307 CDY11P-201ENST00000447168 1651 ntBASIC6.6□□□□□ -1.35
SSR1P43307 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSR1P43307 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.6□□□□□ -1.35
SSR1P43307 AL353763.1-201ENST00000624467 1628 ntBASIC6.6□□□□□ -1.35
SSR1P43307 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
SSR1P43307 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSR1P43307 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSR1P43307 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSR1P43307 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
SSR1P43307 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSR1P43307 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.6□□□□□ -1.35
SSR1P43307 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSR1P43307 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.6□□□□□ -1.35
SSR1P43307 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SSR1P43307 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.59□□□□□ -1.35
SSR1P43307 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.59□□□□□ -1.35
SSR1P43307 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSR1P43307 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.59□□□□□ -1.35
SSR1P43307 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.59□□□□□ -1.35
SSR1P43307 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.59□□□□□ -1.35
SSR1P43307 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSR1P43307 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SSR1P43307 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSR1P43307 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSR1P43307 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.59□□□□□ -1.35
SSR1P43307 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSR1P43307 AC003045.1-201ENST00000398779 713 ntBASIC6.59□□□□□ -1.35
SSR1P43307 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.59□□□□□ -1.35
SSR1P43307 CBX1P3-201ENST00000413296 527 ntBASIC6.59□□□□□ -1.35
SSR1P43307 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.59□□□□□ -1.35
SSR1P43307 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.59□□□□□ -1.35
SSR1P43307 RPEP4-201ENST00000437636 602 ntBASIC6.59□□□□□ -1.35
SSR1P43307 BX679664.2-201ENST00000439282 283 ntBASIC6.59□□□□□ -1.35
SSR1P43307 AC079922.1-201ENST00000443291 359 ntBASIC6.59□□□□□ -1.35
SSR1P43307 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.59□□□□□ -1.35
SSR1P43307 COX4I1P2-201ENST00000447446 547 ntBASIC6.59□□□□□ -1.35
SSR1P43307 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SSR1P43307 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.59□□□□□ -1.35
SSR1P43307 RANP2-201ENST00000456833 229 ntBASIC6.59□□□□□ -1.35
SSR1P43307 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.59□□□□□ -1.35
SSR1P43307 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.59□□□□□ -1.35
SSR1P43307 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.59□□□□□ -1.35
SSR1P43307 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.59□□□□□ -1.35
SSR1P43307 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.59□□□□□ -1.35
SSR1P43307 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.59□□□□□ -1.35
SSR1P43307 RNU2-45P-201ENST00000516068 187 ntBASIC6.59□□□□□ -1.35
SSR1P43307 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.59□□□□□ -1.35
SSR1P43307 RN7SL66P-201ENST00000582099 264 ntBASIC6.59□□□□□ -1.35
SSR1P43307 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.59□□□□□ -1.35
SSR1P43307 AC005332.4-201ENST00000592752 579 ntBASIC6.59□□□□□ -1.35
SSR1P43307 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.59□□□□□ -1.35
SSR1P43307 AL021368.3-201ENST00000607119 578 ntBASIC6.59□□□□□ -1.35
SSR1P43307 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.59□□□□□ -1.35
SSR1P43307 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.59□□□□□ -1.35
SSR1P43307 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.59□□□□□ -1.35
SSR1P43307 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSR1P43307 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SSR1P43307 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.59□□□□□ -1.35
SSR1P43307 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SSR1P43307 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.36
SSR1P43307 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.58□□□□□ -1.36
SSR1P43307 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
SSR1P43307 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSR1P43307 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSR1P43307 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.58□□□□□ -1.36
SSR1P43307 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSR1P43307 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSR1P43307 AC092451.3-201ENST00000625067 1343 ntBASIC6.58□□□□□ -1.36
SSR1P43307 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSR1P43307 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.58□□□□□ -1.36
SSR1P43307 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.58□□□□□ -1.36
SSR1P43307 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSR1P43307 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSR1P43307 RNA5SP85-201ENST00000365378 119 ntBASIC6.58□□□□□ -1.36
SSR1P43307 ARSFP1-201ENST00000398758 477 ntBASIC6.58□□□□□ -1.36
SSR1P43307 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSR1P43307 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.58□□□□□ -1.36
SSR1P43307 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.58□□□□□ -1.36
SSR1P43307 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.58□□□□□ -1.36
SSR1P43307 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.58□□□□□ -1.36
SSR1P43307 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.58□□□□□ -1.36
SSR1P43307 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.58□□□□□ -1.36
SSR1P43307 PA2G4P1-201ENST00000442248 1197 ntBASIC6.58□□□□□ -1.36
SSR1P43307 AL031681.1-201ENST00000443304 400 ntBASIC6.58□□□□□ -1.36
SSR1P43307 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.58□□□□□ -1.36
SSR1P43307 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.58□□□□□ -1.36
SSR1P43307 DEFB109A-201ENST00000482450 265 ntBASIC6.58□□□□□ -1.36
SSR1P43307 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.58□□□□□ -1.36
SSR1P43307 GM2AP2-201ENST00000491764 562 ntBASIC6.58□□□□□ -1.36
SSR1P43307 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.58□□□□□ -1.36
SSR1P43307 AC138409.2-202ENST00000507274 458 ntBASIC6.58□□□□□ -1.36
SSR1P43307 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.58□□□□□ -1.36
SSR1P43307 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.58□□□□□ -1.36
SSR1P43307 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.58□□□□□ -1.36
SSR1P43307 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSR1P43307 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.58□□□□□ -1.36
SSR1P43307 AC092865.1-201ENST00000544395 1023 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms