Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MAST4-IT1-201ENST00000514241 658 ntBASIC5.58□□□□□ -1.52
SHC1P29353 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHC1P29353 RPA2P3-201ENST00000533268 770 ntBASIC5.58□□□□□ -1.52
SHC1P29353 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.58□□□□□ -1.52
SHC1P29353 MIR4502-201ENST00000580432 81 ntBASIC5.58□□□□□ -1.52
SHC1P29353 AC124916.2-201ENST00000604416 224 ntBASIC5.58□□□□□ -1.52
SHC1P29353 RFPL4AP6-201ENST00000616792 846 ntBASIC5.58□□□□□ -1.52
SHC1P29353 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SHC1P29353 AL031658.2-201ENST00000616850 651 ntBASIC5.58□□□□□ -1.52
SHC1P29353 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.58□□□□□ -1.52
SHC1P29353 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHC1P29353 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.58□□□□□ -1.52
SHC1P29353 AL359955.1-201ENST00000455242 3275 ntBASIC5.58□□□□□ -1.52
SHC1P29353 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHC1P29353 XKRY2-202ENST00000623874 1581 ntBASIC5.58□□□□□ -1.52
SHC1P29353 XKRY-202ENST00000624960 1581 ntBASIC5.58□□□□□ -1.52
SHC1P29353 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHC1P29353 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SHC1P29353 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHC1P29353 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SHC1P29353 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHC1P29353 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHC1P29353 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHC1P29353 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHC1P29353 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.57□□□□□ -1.52
SHC1P29353 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHC1P29353 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.57□□□□□ -1.52
SHC1P29353 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHC1P29353 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHC1P29353 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHC1P29353 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.57□□□□□ -1.52
SHC1P29353 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SHC1P29353 AC096921.2-201ENST00000561507 1916 ntBASIC5.57□□□□□ -1.52
SHC1P29353 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
SHC1P29353 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SHC1P29353 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.57□□□□□ -1.52
SHC1P29353 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.57□□□□□ -1.52
SHC1P29353 RN7SKP151-201ENST00000410230 316 ntBASIC5.57□□□□□ -1.52
SHC1P29353 RNA5SP431-201ENST00000410312 120 ntBASIC5.57□□□□□ -1.52
SHC1P29353 RN7SKP144-201ENST00000411108 279 ntBASIC5.57□□□□□ -1.52
SHC1P29353 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.57□□□□□ -1.52
SHC1P29353 AC023141.3-201ENST00000436698 278 ntBASIC5.57□□□□□ -1.52
SHC1P29353 AC068491.1-201ENST00000449539 1241 ntBASIC5.57□□□□□ -1.52
SHC1P29353 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.57□□□□□ -1.52
SHC1P29353 RPL7L1P3-201ENST00000455249 689 ntBASIC5.57□□□□□ -1.52
SHC1P29353 AL035690.1-201ENST00000490892 383 ntBASIC5.57□□□□□ -1.52
SHC1P29353 AP002453.1-201ENST00000492327 668 ntBASIC5.57□□□□□ -1.52
SHC1P29353 RPL37P23-201ENST00000492641 294 ntBASIC5.57□□□□□ -1.52
SHC1P29353 AC008945.1-201ENST00000505144 499 ntBASIC5.57□□□□□ -1.52
SHC1P29353 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.57□□□□□ -1.52
SHC1P29353 HSD3BP3-201ENST00000514706 994 ntBASIC5.57□□□□□ -1.52
SHC1P29353 IGKV2-19-201ENST00000518132 283 ntBASIC5.57□□□□□ -1.52
SHC1P29353 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.57□□□□□ -1.52
SHC1P29353 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.57□□□□□ -1.52
SHC1P29353 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.57□□□□□ -1.52
SHC1P29353 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SHC1P29353 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.57□□□□□ -1.52
SHC1P29353 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.57□□□□□ -1.52
SHC1P29353 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.57□□□□□ -1.52
SHC1P29353 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.57□□□□□ -1.52
SHC1P29353 AP001267.4-201ENST00000602598 545 ntBASIC5.57□□□□□ -1.52
SHC1P29353 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.57□□□□□ -1.52
SHC1P29353 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.57□□□□□ -1.52
SHC1P29353 AL137067.2-201ENST00000621202 131 ntBASIC5.57□□□□□ -1.52
SHC1P29353 AC069234.4-201ENST00000621276 412 ntBASIC5.57□□□□□ -1.52
SHC1P29353 OR8A1-204ENST00000642111 1145 ntBASIC5.57□□□□□ -1.52
SHC1P29353 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.57□□□□□ -1.52
SHC1P29353 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SHC1P29353 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHC1P29353 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.57□□□□□ -1.52
SHC1P29353 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHC1P29353 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHC1P29353 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.57□□□□□ -1.52
SHC1P29353 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHC1P29353 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHC1P29353 MSL3P1-202ENST00000440028 1468 ntBASIC5.57□□□□□ -1.52
SHC1P29353 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHC1P29353 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SHC1P29353 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHC1P29353 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHC1P29353 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SHC1P29353 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.56□□□□□ -1.52
SHC1P29353 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.56□□□□□ -1.52
SHC1P29353 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SHC1P29353 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.56□□□□□ -1.52
SHC1P29353 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SHC1P29353 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHC1P29353 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.56□□□□□ -1.52
SHC1P29353 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
SHC1P29353 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
SHC1P29353 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHC1P29353 RPL7AP14-201ENST00000424041 802 ntBASIC5.56□□□□□ -1.52
SHC1P29353 AC016027.5-201ENST00000427227 210 ntBASIC5.56□□□□□ -1.52
SHC1P29353 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.56□□□□□ -1.52
SHC1P29353 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.56□□□□□ -1.52
SHC1P29353 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.56□□□□□ -1.52
SHC1P29353 AL390879.1-201ENST00000439143 386 ntBASIC5.56□□□□□ -1.52
SHC1P29353 AC118758.1-202ENST00000454719 225 ntBASIC5.56□□□□□ -1.52
SHC1P29353 RN7SL254P-201ENST00000460609 284 ntBASIC5.56□□□□□ -1.52
SHC1P29353 AC108103.1-201ENST00000511286 446 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms