Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHA3P29320 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
EPHA3P29320 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHA3P29320 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHA3P29320 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHA3P29320 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EPHA3P29320 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHA3P29320 PPIAP24-201ENST00000328558 471 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 MIR365B-201ENST00000362317 111 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 RNA5SP514-201ENST00000363717 111 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 RNA5SP355-201ENST00000365317 135 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 AC074375.1-201ENST00000372993 192 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.16□□□□□ -1.42
EPHA3P29320 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EPHA3P29320 RPL23AP17-201ENST00000401064 499 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EPHA3P29320 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EPHA3P29320 RPL18AP14-201ENST00000417685 526 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHA3P29320 AC092570.3-201ENST00000420113 693 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 AC021876.1-201ENST00000425959 359 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.16□□□□□ -1.42
EPHA3P29320 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 Z99127.2-201ENST00000441426 334 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 AL353803.3-201ENST00000444641 335 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 AL606517.1-201ENST00000446914 387 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 UBBP5-201ENST00000446970 266 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHA3P29320 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.16□□□□□ -1.42
EPHA3P29320 RPS4XP19-201ENST00000460237 736 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EPHA3P29320 AC135999.1-201ENST00000478962 479 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.16□□□□□ -1.42
EPHA3P29320 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.16□□□□□ -1.42
EPHA3P29320 EIF4E2P2-201ENST00000492033 736 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 RPL10P7-201ENST00000495649 625 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.16□□□□□ -1.42
EPHA3P29320 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.16□□□□□ -1.42
EPHA3P29320 NAMPTP2-201ENST00000505629 1115 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EPHA3P29320 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.16□□□□□ -1.42
EPHA3P29320 AC034244.2-201ENST00000514668 858 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 RN7SKP242-201ENST00000515967 289 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 RNU6-334P-201ENST00000517072 102 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
EPHA3P29320 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.16□□□□□ -1.42
EPHA3P29320 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHA3P29320 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.16□□□□□ -1.42
EPHA3P29320 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.16□□□□□ -1.42
EPHA3P29320 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHA3P29320 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.16□□□□□ -1.42
EPHA3P29320 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.16□□□□□ -1.42
EPHA3P29320 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHA3P29320 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.16□□□□□ -1.42
EPHA3P29320 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.16□□□□□ -1.42
EPHA3P29320 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.16□□□□□ -1.42
EPHA3P29320 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHA3P29320 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.16□□□□□ -1.42
EPHA3P29320 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHA3P29320 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHA3P29320 AC019257.2-201ENST00000605539 497 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.16□□□□□ -1.42
EPHA3P29320 AC005828.7-201ENST00000607331 556 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHA3P29320 AC005156.1-201ENST00000613371 573 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 AC097641.3-201ENST00000613523 464 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 AC025016.1-201ENST00000616746 682 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHA3P29320 OR4G3P-201ENST00000633500 913 ntBASIC6.16□□□□□ -1.42
EPHA3P29320 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.16□□□□□ -1.42
EPHA3P29320 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.16□□□□□ -1.42
EPHA3P29320 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHA3P29320 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHA3P29320 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHA3P29320 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHA3P29320 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
EPHA3P29320 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
EPHA3P29320 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EPHA3P29320 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.16□□□□□ -1.42
EPHA3P29320 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.15□□□□□ -1.42
EPHA3P29320 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.15□□□□□ -1.42
EPHA3P29320 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
EPHA3P29320 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.15□□□□□ -1.42
EPHA3P29320 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
EPHA3P29320 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
EPHA3P29320 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
EPHA3P29320 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.15□□□□□ -1.42
EPHA3P29320 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.15□□□□□ -1.42
EPHA3P29320 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.15□□□□□ -1.42
EPHA3P29320 AP000641.1-201ENST00000531988 1639 ntBASIC6.15□□□□□ -1.42
EPHA3P29320 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.15□□□□□ -1.42
EPHA3P29320 CASC19-261ENST00000641853 1638 ntBASIC6.15□□□□□ -1.42
EPHA3P29320 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.15□□□□□ -1.42
EPHA3P29320 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
EPHA3P29320 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
EPHA3P29320 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
EPHA3P29320 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
EPHA3P29320 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
EPHA3P29320 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
EPHA3P29320 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms