Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 OR7E91P-202ENST00000642062 1198 ntBASIC6.14□□□□□ -1.43
CDH3P22223 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH3P22223 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH3P22223 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH3P22223 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CDH3P22223 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH3P22223 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CDH3P22223 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH3P22223 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH3P22223 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH3P22223 AC093671.1-201ENST00000624981 2929 ntBASIC6.14□□□□□ -1.43
CDH3P22223 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
CDH3P22223 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH3P22223 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH3P22223 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH3P22223 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CDH3P22223 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH3P22223 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH3P22223 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH3P22223 Z95114.1-201ENST00000624264 14574 ntBASIC6.13□□□□□ -1.43
CDH3P22223 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH3P22223 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH3P22223 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CDH3P22223 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CDH3P22223 FAM32BP-201ENST00000344033 333 ntBASIC6.13□□□□□ -1.43
CDH3P22223 RNU6-167P-201ENST00000384292 106 ntBASIC6.13□□□□□ -1.43
CDH3P22223 U3.23-201ENST00000391132 200 ntBASIC6.13□□□□□ -1.43
CDH3P22223 RAB5CP1-201ENST00000395972 580 ntBASIC6.13□□□□□ -1.43
CDH3P22223 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH3P22223 RPS26P38-201ENST00000414476 348 ntBASIC6.13□□□□□ -1.43
CDH3P22223 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.13□□□□□ -1.43
CDH3P22223 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH3P22223 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CDH3P22223 VN1R38P-201ENST00000450265 887 ntBASIC6.13□□□□□ -1.43
CDH3P22223 snoU13.29-201ENST00000459370 104 ntBASIC6.13□□□□□ -1.43
CDH3P22223 RN7SL254P-201ENST00000460609 284 ntBASIC6.13□□□□□ -1.43
CDH3P22223 RN7SL643P-201ENST00000471845 291 ntBASIC6.13□□□□□ -1.43
CDH3P22223 AC135999.1-201ENST00000478962 479 ntBASIC6.13□□□□□ -1.43
CDH3P22223 RN7SL170P-201ENST00000487098 295 ntBASIC6.13□□□□□ -1.43
CDH3P22223 AP002453.1-201ENST00000492327 668 ntBASIC6.13□□□□□ -1.43
CDH3P22223 RPL37P23-201ENST00000492641 294 ntBASIC6.13□□□□□ -1.43
CDH3P22223 AC090058.1-201ENST00000498788 435 ntBASIC6.13□□□□□ -1.43
CDH3P22223 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH3P22223 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH3P22223 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH3P22223 RNA5SP206-201ENST00000516703 121 ntBASIC6.13□□□□□ -1.43
CDH3P22223 IGHV4-55-201ENST00000520889 368 ntBASIC6.13□□□□□ -1.43
CDH3P22223 AC084121.1-201ENST00000533882 835 ntBASIC6.13□□□□□ -1.43
CDH3P22223 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH3P22223 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH3P22223 AC004232.2-201ENST00000574245 821 ntBASIC6.13□□□□□ -1.43
CDH3P22223 OR1E3-201ENST00000575608 948 ntBASIC6.13□□□□□ -1.43
CDH3P22223 MIR4502-201ENST00000580432 81 ntBASIC6.13□□□□□ -1.43
CDH3P22223 RN7SL475P-201ENST00000583379 298 ntBASIC6.13□□□□□ -1.43
CDH3P22223 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH3P22223 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH3P22223 LSM1P2-201ENST00000604911 322 ntBASIC6.13□□□□□ -1.43
CDH3P22223 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.13□□□□□ -1.43
CDH3P22223 CAP1P2-201ENST00000417455 1409 ntBASIC6.13□□□□□ -1.43
CDH3P22223 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH3P22223 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH3P22223 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH3P22223 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH3P22223 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH3P22223 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CDH3P22223 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH3P22223 AC025470.1-201ENST00000510053 2032 ntBASIC6.13□□□□□ -1.43
CDH3P22223 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH3P22223 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH3P22223 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH3P22223 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH3P22223 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH3P22223 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH3P22223 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH3P22223 LCN1P2-201ENST00000372030 223 ntBASIC6.12□□□□□ -1.43
CDH3P22223 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH3P22223 AL139805.1-201ENST00000407837 289 ntBASIC6.12□□□□□ -1.43
CDH3P22223 RNA5SP198-201ENST00000410376 127 ntBASIC6.12□□□□□ -1.43
CDH3P22223 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH3P22223 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH3P22223 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH3P22223 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.12□□□□□ -1.43
CDH3P22223 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.12□□□□□ -1.43
CDH3P22223 AC092865.3-201ENST00000425390 1026 ntBASIC6.12□□□□□ -1.43
CDH3P22223 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH3P22223 AC112492.2-201ENST00000432774 1030 ntBASIC6.12□□□□□ -1.43
CDH3P22223 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH3P22223 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH3P22223 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.12□□□□□ -1.43
CDH3P22223 NEK2P2-201ENST00000438441 1338 ntBASIC6.12□□□□□ -1.43
CDH3P22223 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH3P22223 MTND4LP12-201ENST00000448237 295 ntBASIC6.12□□□□□ -1.43
CDH3P22223 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH3P22223 NPM1P27-201ENST00000502784 830 ntBASIC6.12□□□□□ -1.43
CDH3P22223 LDHAP1-201ENST00000509421 992 ntBASIC6.12□□□□□ -1.43
CDH3P22223 HMGN1P17-201ENST00000513734 295 ntBASIC6.12□□□□□ -1.43
CDH3P22223 ZNF519P4-201ENST00000514008 125 ntBASIC6.12□□□□□ -1.43
CDH3P22223 MAST4-IT1-201ENST00000514241 658 ntBASIC6.12□□□□□ -1.43
CDH3P22223 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH3P22223 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms