Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC114728.1-201ENST00000488289 483 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 ZNF519P4-201ENST00000514008 125 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 MIR3154-201ENST00000577829 84 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 AC020916.2-201ENST00000591242 360 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 RPSAP75-201ENST00000605848 301 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 AL359091.2-201ENST00000609303 556 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 AC011503.2-201ENST00000594230 1500 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 AC092111.2-201ENST00000611627 1414 ntBASIC6.23□□□□□ -1.41
HLA-DPA1P20036 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DPA1P20036 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.22□□□□□ -1.41
HLA-DPA1P20036 RPL7AP14-201ENST00000424041 802 ntBASIC6.22□□□□□ -1.41
HLA-DPA1P20036 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 OR6C71P-201ENST00000432580 913 ntBASIC6.22□□□□□ -1.41
HLA-DPA1P20036 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 AC073594.1-201ENST00000462065 364 ntBASIC6.22□□□□□ -1.41
HLA-DPA1P20036 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 AC106822.1-201ENST00000502647 526 ntBASIC6.22□□□□□ -1.41
HLA-DPA1P20036 CYP4F27P-201ENST00000514557 494 ntBASIC6.22□□□□□ -1.41
HLA-DPA1P20036 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 NPIPB14P-203ENST00000532298 987 ntBASIC6.22□□□□□ -1.41
HLA-DPA1P20036 AC036111.2-201ENST00000533247 901 ntBASIC6.22□□□□□ -1.41
HLA-DPA1P20036 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 VN1R81P-201ENST00000602085 372 ntBASIC6.22□□□□□ -1.41
HLA-DPA1P20036 AC027334.1-201ENST00000603257 310 ntBASIC6.22□□□□□ -1.41
HLA-DPA1P20036 AC008555.7-201ENST00000605008 583 ntBASIC6.22□□□□□ -1.41
HLA-DPA1P20036 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 TMCC1P1-201ENST00000518897 1980 ntBASIC6.22□□□□□ -1.41
HLA-DPA1P20036 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 AL117378.2-201ENST00000622916 1337 ntBASIC6.22□□□□□ -1.41
HLA-DPA1P20036 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DPA1P20036 Z83820.1-201ENST00000456978 1499 ntBASIC6.22□□□□□ -1.41
HLA-DPA1P20036 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
HLA-DPA1P20036 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HLA-DPA1P20036 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
HLA-DPA1P20036 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.21□□□□□ -1.41
HLA-DPA1P20036 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
HLA-DPA1P20036 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.21□□□□□ -1.41
HLA-DPA1P20036 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
HLA-DPA1P20036 AL121839.2-201ENST00000565058 6943 ntBASIC6.21□□□□□ -1.41
HLA-DPA1P20036 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
HLA-DPA1P20036 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 RN7SKP86-201ENST00000410454 332 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 RNU2-18P-201ENST00000411224 162 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 VN1R3-201ENST00000418822 919 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AC016027.5-201ENST00000427227 210 ntBASIC6.21□□□□□ -1.42
HLA-DPA1P20036 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DPA1P20036 MTCO3P17-201ENST00000443775 513 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms