Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
ATF1P18846 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATF1P18846 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
ATF1P18846 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATF1P18846 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
ATF1P18846 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
ATF1P18846 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 CASC19-246ENST00000641625 1606 ntBASIC5.26□□□□□ -1.57
ATF1P18846 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
ATF1P18846 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
ATF1P18846 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF1P18846 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 RNA5SP375-201ENST00000362975 119 ntBASIC5.26□□□□□ -1.57
ATF1P18846 RNA5SP346-201ENST00000363541 121 ntBASIC5.26□□□□□ -1.57
ATF1P18846 AL157702.1-201ENST00000398764 426 ntBASIC5.26□□□□□ -1.57
ATF1P18846 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 RN7SKP166-201ENST00000410812 305 ntBASIC5.26□□□□□ -1.57
ATF1P18846 METTL15P3-201ENST00000415522 1221 ntBASIC5.26□□□□□ -1.57
ATF1P18846 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF1P18846 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.26□□□□□ -1.57
ATF1P18846 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.26□□□□□ -1.57
ATF1P18846 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF1P18846 AC099670.2-201ENST00000435130 321 ntBASIC5.26□□□□□ -1.57
ATF1P18846 AL031681.1-201ENST00000443304 400 ntBASIC5.26□□□□□ -1.57
ATF1P18846 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF1P18846 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
ATF1P18846 HIGD1AP16-201ENST00000450986 258 ntBASIC5.26□□□□□ -1.57
ATF1P18846 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF1P18846 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
ATF1P18846 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF1P18846 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF1P18846 RN7SL104P-201ENST00000498686 293 ntBASIC5.26□□□□□ -1.57
ATF1P18846 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF1P18846 CCDC11P1-201ENST00000503137 1162 ntBASIC5.26□□□□□ -1.57
ATF1P18846 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF1P18846 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF1P18846 RN7SKP288-201ENST00000516227 268 ntBASIC5.26□□□□□ -1.57
ATF1P18846 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.26□□□□□ -1.57
ATF1P18846 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.26□□□□□ -1.57
ATF1P18846 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF1P18846 OR8Q1P-201ENST00000526467 655 ntBASIC5.26□□□□□ -1.57
ATF1P18846 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 TDGP1-201ENST00000543961 1229 ntBASIC5.26□□□□□ -1.57
ATF1P18846 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.26□□□□□ -1.57
ATF1P18846 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF1P18846 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.26□□□□□ -1.57
ATF1P18846 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF1P18846 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF1P18846 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF1P18846 MIR6883-201ENST00000614952 78 ntBASIC5.26□□□□□ -1.57
ATF1P18846 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.26□□□□□ -1.57
ATF1P18846 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.26□□□□□ -1.57
ATF1P18846 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.26□□□□□ -1.57
ATF1P18846 AL355974.3-201ENST00000617383 467 ntBASIC5.26□□□□□ -1.57
ATF1P18846 SNX18P12-201ENST00000624821 759 ntBASIC5.26□□□□□ -1.57
ATF1P18846 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
ATF1P18846 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 ADAM24P-201ENST00000398655 2101 ntBASIC5.26□□□□□ -1.57
ATF1P18846 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATF1P18846 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF1P18846 AC011416.1-201ENST00000514947 1732 ntBASIC5.26□□□□□ -1.57
ATF1P18846 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATF1P18846 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
ATF1P18846 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
ATF1P18846 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
ATF1P18846 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.25□□□□□ -1.57
ATF1P18846 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATF1P18846 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATF1P18846 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ATF1P18846 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATF1P18846 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATF1P18846 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ATF1P18846 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ATF1P18846 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATF1P18846 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATF1P18846 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.25□□□□□ -1.57
ATF1P18846 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.25□□□□□ -1.57
ATF1P18846 YWHAZP4-201ENST00000392459 708 ntBASIC5.25□□□□□ -1.57
ATF1P18846 NPM1P37-201ENST00000403105 874 ntBASIC5.25□□□□□ -1.57
ATF1P18846 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.25□□□□□ -1.57
ATF1P18846 AL158827.1-201ENST00000416300 391 ntBASIC5.25□□□□□ -1.57
ATF1P18846 AC009506.2-201ENST00000420635 840 ntBASIC5.25□□□□□ -1.57
ATF1P18846 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ATF1P18846 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.25□□□□□ -1.57
ATF1P18846 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.25□□□□□ -1.57
ATF1P18846 AC094019.1-201ENST00000434678 472 ntBASIC5.25□□□□□ -1.57
ATF1P18846 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ATF1P18846 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.25□□□□□ -1.57
ATF1P18846 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.25□□□□□ -1.57
ATF1P18846 AC073072.2-201ENST00000447425 348 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms