Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM1P09493 AC060780.2-201ENST00000589047 198 ntBASIC6.63□□□□□ -1.35
TPM1P09493 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM1P09493 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM1P09493 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
TPM1P09493 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.63□□□□□ -1.35
TPM1P09493 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
TPM1P09493 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TPM1P09493 AL031595.2-201ENST00000624215 19071 ntBASIC6.62□□□□□ -1.35
TPM1P09493 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.62□□□□□ -1.35
TPM1P09493 LINC02019-201ENST00000608605 2060 ntBASIC6.62□□□□□ -1.35
TPM1P09493 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 AL442128.2-201ENST00000620246 1824 ntBASIC6.62□□□□□ -1.35
TPM1P09493 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 AC114774.1-201ENST00000507410 1770 ntBASIC6.62□□□□□ -1.35
TPM1P09493 AL132656.3-201ENST00000606384 1595 ntBASIC6.62□□□□□ -1.35
TPM1P09493 AL158152.1-201ENST00000602652 1435 ntBASIC6.62□□□□□ -1.35
TPM1P09493 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM1P09493 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
TPM1P09493 RNA5SP375-201ENST00000362975 119 ntBASIC6.62□□□□□ -1.35
TPM1P09493 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM1P09493 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
TPM1P09493 SNORA5.1-201ENST00000384275 131 ntBASIC6.62□□□□□ -1.35
TPM1P09493 MRPL32P1-201ENST00000406301 247 ntBASIC6.62□□□□□ -1.35
TPM1P09493 AL117344.1-201ENST00000407196 616 ntBASIC6.62□□□□□ -1.35
TPM1P09493 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.62□□□□□ -1.35
TPM1P09493 AC017078.1-201ENST00000416146 368 ntBASIC6.62□□□□□ -1.35
TPM1P09493 DPPA2P2-201ENST00000418220 897 ntBASIC6.62□□□□□ -1.35
TPM1P09493 AC002127.1-201ENST00000421305 225 ntBASIC6.62□□□□□ -1.35
TPM1P09493 RPS7P14-201ENST00000426405 583 ntBASIC6.62□□□□□ -1.35
TPM1P09493 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM1P09493 AC112492.2-201ENST00000432774 1030 ntBASIC6.62□□□□□ -1.35
TPM1P09493 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM1P09493 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM1P09493 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM1P09493 RPL12P31-201ENST00000478433 450 ntBASIC6.62□□□□□ -1.35
TPM1P09493 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM1P09493 AC090958.1-201ENST00000511122 351 ntBASIC6.62□□□□□ -1.35
TPM1P09493 RN7SKP288-201ENST00000516227 268 ntBASIC6.62□□□□□ -1.35
TPM1P09493 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM1P09493 AC103855.4-201ENST00000533158 265 ntBASIC6.62□□□□□ -1.35
TPM1P09493 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM1P09493 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.62□□□□□ -1.35
TPM1P09493 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM1P09493 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM1P09493 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.62□□□□□ -1.35
TPM1P09493 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM1P09493 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM1P09493 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM1P09493 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM1P09493 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
TPM1P09493 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM1P09493 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 AC005224.3-201ENST00000584683 2140 ntBASIC6.62□□□□□ -1.35
TPM1P09493 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 AL161756.3-201ENST00000641216 2071 ntBASIC6.62□□□□□ -1.35
TPM1P09493 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.62□□□□□ -1.35
TPM1P09493 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM1P09493 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM1P09493 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM1P09493 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
TPM1P09493 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
TPM1P09493 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TPM1P09493 AC004158.1-201ENST00000564508 4319 ntBASIC6.61□□□□□ -1.35
TPM1P09493 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.61□□□□□ -1.35
TPM1P09493 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM1P09493 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM1P09493 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM1P09493 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
TPM1P09493 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TPM1P09493 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM1P09493 METTL15P3-201ENST00000415522 1221 ntBASIC6.61□□□□□ -1.35
TPM1P09493 CLCN3P1-201ENST00000423965 1017 ntBASIC6.61□□□□□ -1.35
TPM1P09493 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.61□□□□□ -1.35
TPM1P09493 AC022730.1-201ENST00000473114 568 ntBASIC6.61□□□□□ -1.35
TPM1P09493 RPL5P33-201ENST00000487833 905 ntBASIC6.61□□□□□ -1.35
TPM1P09493 NPM1P28-201ENST00000492269 840 ntBASIC6.61□□□□□ -1.35
TPM1P09493 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
TPM1P09493 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.61□□□□□ -1.35
TPM1P09493 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.61□□□□□ -1.35
TPM1P09493 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.61□□□□□ -1.35
TPM1P09493 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.61□□□□□ -1.35
TPM1P09493 CYCSP25-201ENST00000525280 316 ntBASIC6.61□□□□□ -1.35
TPM1P09493 OR4A43P-201ENST00000532938 908 ntBASIC6.61□□□□□ -1.35
TPM1P09493 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.61□□□□□ -1.35
TPM1P09493 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
TPM1P09493 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM1P09493 AC007346.2-201ENST00000564816 892 ntBASIC6.61□□□□□ -1.35
TPM1P09493 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms