Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MTATP6P25-201ENST00000574491 261 ntBASIC6.63□□□□□ -1.35
RB1P06400 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.63□□□□□ -1.35
RB1P06400 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.63□□□□□ -1.35
RB1P06400 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.63□□□□□ -1.35
RB1P06400 OR7E18P-201ENST00000592589 702 ntBASIC6.63□□□□□ -1.35
RB1P06400 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.63□□□□□ -1.35
RB1P06400 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.63□□□□□ -1.35
RB1P06400 AL031651.1-201ENST00000615357 1438 ntBASIC6.63□□□□□ -1.35
RB1P06400 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.63□□□□□ -1.35
RB1P06400 AP003789.1-201ENST00000617737 605 ntBASIC6.63□□□□□ -1.35
RB1P06400 AC069234.4-201ENST00000621276 412 ntBASIC6.63□□□□□ -1.35
RB1P06400 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
RB1P06400 AC137056.2-201ENST00000624055 1958 ntBASIC6.63□□□□□ -1.35
RB1P06400 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
RB1P06400 MAPK10-344ENST00000641718 3746 ntBASIC6.63□□□□□ -1.35
RB1P06400 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
RB1P06400 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
RB1P06400 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RB1P06400 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.63□□□□□ -1.35
RB1P06400 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
RB1P06400 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.63□□□□□ -1.35
RB1P06400 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.63□□□□□ -1.35
RB1P06400 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RB1P06400 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RB1P06400 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 AC022325.1-201ENST00000502748 2199 ntBASIC6.62□□□□□ -1.35
RB1P06400 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.62□□□□□ -1.35
RB1P06400 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
RB1P06400 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.62□□□□□ -1.35
RB1P06400 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 PSG10P-201ENST00000501199 1500 ntBASIC6.62□□□□□ -1.35
RB1P06400 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
RB1P06400 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.62□□□□□ -1.35
RB1P06400 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.62□□□□□ -1.35
RB1P06400 NEK2P2-201ENST00000438441 1338 ntBASIC6.62□□□□□ -1.35
RB1P06400 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
RB1P06400 RN7SKP161-201ENST00000411110 305 ntBASIC6.62□□□□□ -1.35
RB1P06400 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.62□□□□□ -1.35
RB1P06400 AC245060.4-201ENST00000413293 1121 ntBASIC6.62□□□□□ -1.35
RB1P06400 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.62□□□□□ -1.35
RB1P06400 AL139415.1-201ENST00000424862 352 ntBASIC6.62□□□□□ -1.35
RB1P06400 BX119321.1-201ENST00000428912 797 ntBASIC6.62□□□□□ -1.35
RB1P06400 AL512637.1-201ENST00000439523 1231 ntBASIC6.62□□□□□ -1.35
RB1P06400 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.62□□□□□ -1.35
RB1P06400 YWHAEP1-201ENST00000453697 763 ntBASIC6.62□□□□□ -1.35
RB1P06400 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.62□□□□□ -1.35
RB1P06400 AC124945.1-201ENST00000485133 188 ntBASIC6.62□□□□□ -1.35
RB1P06400 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.62□□□□□ -1.35
RB1P06400 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.62□□□□□ -1.35
RB1P06400 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 IGLV3-6-201ENST00000523937 250 ntBASIC6.62□□□□□ -1.35
RB1P06400 AC022404.1-201ENST00000555320 273 ntBASIC6.62□□□□□ -1.35
RB1P06400 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.62□□□□□ -1.35
RB1P06400 AC090286.3-201ENST00000573133 187 ntBASIC6.62□□□□□ -1.35
RB1P06400 OOSP1P2-201ENST00000579644 351 ntBASIC6.62□□□□□ -1.35
RB1P06400 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.62□□□□□ -1.35
RB1P06400 AL136131.3-201ENST00000607600 188 ntBASIC6.62□□□□□ -1.35
RB1P06400 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.62□□□□□ -1.35
RB1P06400 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.62□□□□□ -1.35
RB1P06400 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RB1P06400 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
RB1P06400 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.62□□□□□ -1.35
RB1P06400 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 OFD1P17-201ENST00000437639 3018 ntBASIC6.62□□□□□ -1.35
RB1P06400 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
RB1P06400 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 AC010329.1-201ENST00000593903 8328 ntBASIC6.62□□□□□ -1.35
RB1P06400 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.62□□□□□ -1.35
RB1P06400 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 MROH3P-201ENST00000435735 2676 ntBASIC6.62□□□□□ -1.35
RB1P06400 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
RB1P06400 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RB1P06400 AC011416.1-201ENST00000514947 1732 ntBASIC6.62□□□□□ -1.35
RB1P06400 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
RB1P06400 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RB1P06400 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
RB1P06400 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.61□□□□□ -1.35
RB1P06400 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.61□□□□□ -1.35
RB1P06400 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
RB1P06400 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.61□□□□□ -1.35
RB1P06400 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RB1P06400 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RB1P06400 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RB1P06400 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RB1P06400 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RB1P06400 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
RB1P06400 AL096711.1-201ENST00000404780 554 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms