Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.62□□□□□ -1.35
VTNP04004 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
VTNP04004 AC006530.1-201ENST00000555980 571 ntBASIC6.62□□□□□ -1.35
VTNP04004 ZNF322P1-201ENST00000568013 1209 ntBASIC6.62□□□□□ -1.35
VTNP04004 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.62□□□□□ -1.35
VTNP04004 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.62□□□□□ -1.35
VTNP04004 AC011497.2-201ENST00000600255 639 ntBASIC6.62□□□□□ -1.35
VTNP04004 RPL12P48-201ENST00000605620 304 ntBASIC6.62□□□□□ -1.35
VTNP04004 AL136131.3-201ENST00000607600 188 ntBASIC6.62□□□□□ -1.35
VTNP04004 MIR4302-201ENST00000638058 60 ntBASIC6.62□□□□□ -1.35
VTNP04004 AC116667.2-201ENST00000641075 823 ntBASIC6.62□□□□□ -1.35
VTNP04004 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
VTNP04004 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VTNP04004 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
VTNP04004 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.62□□□□□ -1.35
VTNP04004 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
VTNP04004 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VTNP04004 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VTNP04004 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
VTNP04004 AC079753.1-201ENST00000623243 3868 ntBASIC6.62□□□□□ -1.35
VTNP04004 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.62□□□□□ -1.35
VTNP04004 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
VTNP04004 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.62□□□□□ -1.35
VTNP04004 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.61□□□□□ -1.35
VTNP04004 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
VTNP04004 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VTNP04004 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
VTNP04004 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.61□□□□□ -1.35
VTNP04004 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VTNP04004 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.61□□□□□ -1.35
VTNP04004 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VTNP04004 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VTNP04004 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VTNP04004 CCNT2P1-201ENST00000423082 1315 ntBASIC6.61□□□□□ -1.35
VTNP04004 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
VTNP04004 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
VTNP04004 SELENOWP1-201ENST00000322792 252 ntBASIC6.61□□□□□ -1.35
VTNP04004 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VTNP04004 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
VTNP04004 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.61□□□□□ -1.35
VTNP04004 RN7SKP206-201ENST00000410823 293 ntBASIC6.61□□□□□ -1.35
VTNP04004 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.61□□□□□ -1.35
VTNP04004 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.61□□□□□ -1.35
VTNP04004 KIF4CP-201ENST00000422742 1279 ntBASIC6.61□□□□□ -1.35
VTNP04004 CHEK2P5-201ENST00000423877 246 ntBASIC6.61□□□□□ -1.35
VTNP04004 TUBB4BP6-201ENST00000437576 479 ntBASIC6.61□□□□□ -1.35
VTNP04004 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.61□□□□□ -1.35
VTNP04004 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.61□□□□□ -1.35
VTNP04004 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.61□□□□□ -1.35
VTNP04004 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.61□□□□□ -1.35
VTNP04004 NXT1P1-201ENST00000458481 316 ntBASIC6.61□□□□□ -1.35
VTNP04004 RN7SL165P-201ENST00000477476 291 ntBASIC6.61□□□□□ -1.35
VTNP04004 AC068522.1-201ENST00000482895 345 ntBASIC6.61□□□□□ -1.35
VTNP04004 AC008629.2-201ENST00000503783 483 ntBASIC6.61□□□□□ -1.35
VTNP04004 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
VTNP04004 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.61□□□□□ -1.35
VTNP04004 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.61□□□□□ -1.35
VTNP04004 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.61□□□□□ -1.35
VTNP04004 AC135626.1-201ENST00000556983 435 ntBASIC6.61□□□□□ -1.35
VTNP04004 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.61□□□□□ -1.35
VTNP04004 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.61□□□□□ -1.35
VTNP04004 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.61□□□□□ -1.35
VTNP04004 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.61□□□□□ -1.35
VTNP04004 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.61□□□□□ -1.35
VTNP04004 COX6CP7-201ENST00000597056 208 ntBASIC6.61□□□□□ -1.35
VTNP04004 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.61□□□□□ -1.35
VTNP04004 uc_338.26-201ENST00000612659 160 ntBASIC6.61□□□□□ -1.35
VTNP04004 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.61□□□□□ -1.35
VTNP04004 OR8G3P-202ENST00000641572 1255 ntBASIC6.61□□□□□ -1.35
VTNP04004 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.61□□□□□ -1.35
VTNP04004 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VTNP04004 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VTNP04004 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VTNP04004 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.61□□□□□ -1.35
VTNP04004 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
VTNP04004 WDR95P-201ENST00000425638 1542 ntBASIC6.6□□□□□ -1.35
VTNP04004 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
VTNP04004 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VTNP04004 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VTNP04004 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.6□□□□□ -1.35
VTNP04004 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.6□□□□□ -1.35
VTNP04004 AC015689.2-201ENST00000528172 1738 ntBASIC6.6□□□□□ -1.35
VTNP04004 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VTNP04004 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
VTNP04004 FUNDC2P3-201ENST00000334716 533 ntBASIC6.6□□□□□ -1.35
VTNP04004 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.6□□□□□ -1.35
VTNP04004 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
VTNP04004 EEF1B2P8-201ENST00000414101 671 ntBASIC6.6□□□□□ -1.35
VTNP04004 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.6□□□□□ -1.35
VTNP04004 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.6□□□□□ -1.35
VTNP04004 RPL23AP60-201ENST00000450011 454 ntBASIC6.6□□□□□ -1.35
VTNP04004 AC011411.1-201ENST00000509592 876 ntBASIC6.6□□□□□ -1.35
VTNP04004 AC106872.4-201ENST00000510050 523 ntBASIC6.6□□□□□ -1.35
VTNP04004 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.6□□□□□ -1.35
VTNP04004 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VTNP04004 AP000648.1-201ENST00000529682 397 ntBASIC6.6□□□□□ -1.35
VTNP04004 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.6□□□□□ -1.35
VTNP04004 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.6□□□□□ -1.35
VTNP04004 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.6□□□□□ -1.35
VTNP04004 AL356801.1-201ENST00000559320 294 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms