Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
MT-ND1P03886 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MT-ND1P03886 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MT-ND1P03886 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MT-ND1P03886 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MT-ND1P03886 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.67□□□□□ -1.5
MT-ND1P03886 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
MT-ND1P03886 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MT-ND1P03886 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.67□□□□□ -1.5
MT-ND1P03886 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
MT-ND1P03886 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MT-ND1P03886 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MT-ND1P03886 SNORD94-201ENST00000386037 137 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 VIM2P-201ENST00000402383 1294 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 RN7SKP121-201ENST00000410842 305 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 UBTFL2-201ENST00000411859 1191 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 PTCD2P2-201ENST00000415579 1095 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 RPL21P50-201ENST00000417698 477 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.67□□□□□ -1.5
MT-ND1P03886 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.67□□□□□ -1.5
MT-ND1P03886 GTF3AP6-201ENST00000432585 986 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 EMC3-AS1-205ENST00000438698 534 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 AL034369.1-201ENST00000453808 477 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 RN7SL326P-201ENST00000477493 296 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 AC122714.1-201ENST00000502510 459 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 AC114324.2-202ENST00000503812 134 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 RN7SKP288-201ENST00000516227 268 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 AC131935.1-201ENST00000524621 333 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 AP001858.2-201ENST00000536213 601 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.67□□□□□ -1.5
MT-ND1P03886 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.67□□□□□ -1.5
MT-ND1P03886 AC008055.1-201ENST00000547032 609 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.67□□□□□ -1.5
MT-ND1P03886 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.67□□□□□ -1.5
MT-ND1P03886 AC027796.1-201ENST00000575593 512 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 AC026898.1-201ENST00000586404 571 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 uc_338.26-201ENST00000612659 160 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 AC007204.1-201ENST00000621794 555 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.67□□□□□ -1.5
MT-ND1P03886 CLUHP10-201ENST00000631979 980 ntBASIC5.67□□□□□ -1.5
MT-ND1P03886 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.67□□□□□ -1.5
MT-ND1P03886 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
MT-ND1P03886 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.67□□□□□ -1.5
MT-ND1P03886 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.67□□□□□ -1.5
MT-ND1P03886 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MT-ND1P03886 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
MT-ND1P03886 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
MT-ND1P03886 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.67□□□□□ -1.5
MT-ND1P03886 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MT-ND1P03886 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
MT-ND1P03886 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.66□□□□□ -1.5
MT-ND1P03886 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MT-ND1P03886 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
MT-ND1P03886 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.66□□□□□ -1.5
MT-ND1P03886 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MT-ND1P03886 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
MT-ND1P03886 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
MT-ND1P03886 RNU1-49P-201ENST00000363468 159 ntBASIC5.66□□□□□ -1.5
MT-ND1P03886 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.66□□□□□ -1.5
MT-ND1P03886 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.66□□□□□ -1.5
MT-ND1P03886 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MT-ND1P03886 AL691447.1-201ENST00000419456 387 ntBASIC5.66□□□□□ -1.5
MT-ND1P03886 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.66□□□□□ -1.5
MT-ND1P03886 AC002127.1-201ENST00000421305 225 ntBASIC5.66□□□□□ -1.5
MT-ND1P03886 REG1CP-206ENST00000447469 496 ntBASIC5.66□□□□□ -1.5
MT-ND1P03886 AC068491.1-201ENST00000449539 1241 ntBASIC5.66□□□□□ -1.5
MT-ND1P03886 ACA64.4-201ENST00000459070 127 ntBASIC5.66□□□□□ -1.5
MT-ND1P03886 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.66□□□□□ -1.5
MT-ND1P03886 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.66□□□□□ -1.5
MT-ND1P03886 SNX18P24-201ENST00000505249 671 ntBASIC5.66□□□□□ -1.5
MT-ND1P03886 AC093325.1-201ENST00000508378 326 ntBASIC5.66□□□□□ -1.5
MT-ND1P03886 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.66□□□□□ -1.5
MT-ND1P03886 EIF4EP5-201ENST00000528228 640 ntBASIC5.66□□□□□ -1.5
MT-ND1P03886 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.66□□□□□ -1.5
MT-ND1P03886 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.66□□□□□ -1.5
MT-ND1P03886 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.66□□□□□ -1.5
MT-ND1P03886 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.66□□□□□ -1.5
MT-ND1P03886 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.66□□□□□ -1.5
MT-ND1P03886 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.66□□□□□ -1.5
MT-ND1P03886 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
MT-ND1P03886 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MT-ND1P03886 AC016583.1-201ENST00000624221 2431 ntBASIC5.66□□□□□ -1.5
MT-ND1P03886 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
MT-ND1P03886 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
MT-ND1P03886 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
MT-ND1P03886 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
MT-ND1P03886 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
MT-ND1P03886 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MT-ND1P03886 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MT-ND1P03886 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MT-ND1P03886 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
MT-ND1P03886 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.65□□□□□ -1.5
MT-ND1P03886 NLRP3P1-201ENST00000622303 1785 ntBASIC5.65□□□□□ -1.5
MT-ND1P03886 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
MT-ND1P03886 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
MT-ND1P03886 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
MT-ND1P03886 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms