Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FOXN3O00409 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXN3O00409 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXN3O00409 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FOXN3O00409 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXN3O00409 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.75□□□□□ -1.33
FOXN3O00409 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
FOXN3O00409 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXN3O00409 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXN3O00409 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXN3O00409 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXN3O00409 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXN3O00409 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
FOXN3O00409 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXN3O00409 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXN3O00409 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXN3O00409 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXN3O00409 AC096921.2-201ENST00000561507 1916 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXN3O00409 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXN3O00409 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
FOXN3O00409 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
FOXN3O00409 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXN3O00409 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXN3O00409 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXN3O00409 CXADRP1-201ENST00000398098 1095 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXN3O00409 RN7SKP129-201ENST00000410288 299 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXN3O00409 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXN3O00409 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXN3O00409 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXN3O00409 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXN3O00409 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXN3O00409 MORF4-201ENST00000447135 971 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.74□□□□□ -1.33
FOXN3O00409 RPL12P31-201ENST00000478433 450 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 SUMO2P4-201ENST00000504193 276 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXN3O00409 RNU6-319P-201ENST00000516025 108 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXN3O00409 SUMO2P19-201ENST00000518920 295 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 OR4A46P-201ENST00000527255 933 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 AC135983.3-201ENST00000528049 1226 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXN3O00409 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
FOXN3O00409 AC134349.2-201ENST00000535136 910 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXN3O00409 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXN3O00409 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXN3O00409 AC037479.1-201ENST00000558361 625 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.74□□□□□ -1.33
FOXN3O00409 NPIPB1P-202ENST00000588786 828 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 AC063977.7-201ENST00000594454 337 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXN3O00409 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXN3O00409 CXADRP3-202ENST00000617265 1100 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 MIR7159-201ENST00000620587 66 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 AC021766.1-201ENST00000624404 741 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 AC018659.2-201ENST00000624690 715 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 OR7E91P-202ENST00000642062 1198 ntBASIC6.74□□□□□ -1.33
FOXN3O00409 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXN3O00409 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXN3O00409 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXN3O00409 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
FOXN3O00409 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXN3O00409 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXN3O00409 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
FOXN3O00409 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXN3O00409 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXN3O00409 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXN3O00409 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXN3O00409 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXN3O00409 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXN3O00409 AC027279.1-201ENST00000568885 4284 ntBASIC6.73□□□□□ -1.33
FOXN3O00409 AC007114.2-201ENST00000576014 4281 ntBASIC6.73□□□□□ -1.33
FOXN3O00409 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXN3O00409 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXN3O00409 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXN3O00409 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXN3O00409 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXN3O00409 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
FOXN3O00409 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXN3O00409 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXN3O00409 AL360271.1-201ENST00000395679 510 ntBASIC6.73□□□□□ -1.33
FOXN3O00409 AL356968.2-201ENST00000412769 1257 ntBASIC6.73□□□□□ -1.33
FOXN3O00409 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXN3O00409 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXN3O00409 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.73□□□□□ -1.33
FOXN3O00409 ARMC4P1-201ENST00000438905 707 ntBASIC6.73□□□□□ -1.33
FOXN3O00409 ARL5AP3-201ENST00000439327 386 ntBASIC6.73□□□□□ -1.33
FOXN3O00409 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXN3O00409 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXN3O00409 OR2L9P-201ENST00000444456 913 ntBASIC6.73□□□□□ -1.33
FOXN3O00409 AC092601.1-201ENST00000444526 383 ntBASIC6.73□□□□□ -1.33
FOXN3O00409 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXN3O00409 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXN3O00409 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXN3O00409 RN7SL369P-201ENST00000477138 299 ntBASIC6.73□□□□□ -1.33
FOXN3O00409 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms