Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SNORA7A-201ENST00000384765 139 ntBASIC6.27□□□□□ -1.41
CCDC188H7C350 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC188H7C350 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC188H7C350 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.27□□□□□ -1.41
CCDC188H7C350 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC188H7C350 UBE2V2P1-201ENST00000434717 398 ntBASIC6.27□□□□□ -1.41
CCDC188H7C350 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC188H7C350 OR52I1-201ENST00000450052 1050 ntBASIC6.27□□□□□ -1.41
CCDC188H7C350 HIGD1AP16-201ENST00000450986 258 ntBASIC6.27□□□□□ -1.41
CCDC188H7C350 FRG2FP-204ENST00000453982 852 ntBASIC6.27□□□□□ -1.41
CCDC188H7C350 AC108751.3-201ENST00000461814 1020 ntBASIC6.27□□□□□ -1.41
CCDC188H7C350 PPP1R11P1-201ENST00000486095 376 ntBASIC6.27□□□□□ -1.41
CCDC188H7C350 GM2AP2-201ENST00000491764 562 ntBASIC6.27□□□□□ -1.41
CCDC188H7C350 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC188H7C350 RN7SKP5-201ENST00000517045 272 ntBASIC6.27□□□□□ -1.41
CCDC188H7C350 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC188H7C350 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC188H7C350 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC188H7C350 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC188H7C350 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.27□□□□□ -1.41
CCDC188H7C350 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.27□□□□□ -1.41
CCDC188H7C350 AC234775.3-201ENST00000564612 656 ntBASIC6.27□□□□□ -1.41
CCDC188H7C350 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC188H7C350 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC188H7C350 AP003400.2-201ENST00000624036 666 ntBASIC6.27□□□□□ -1.41
CCDC188H7C350 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC188H7C350 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC188H7C350 AC239868.2-201ENST00000564237 4527 ntBASIC6.27□□□□□ -1.41
CCDC188H7C350 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CCDC188H7C350 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCDC188H7C350 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC188H7C350 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
CCDC188H7C350 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC188H7C350 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC188H7C350 AC004023.1-201ENST00000561473 1744 ntBASIC6.27□□□□□ -1.41
CCDC188H7C350 AC027279.4-201ENST00000624371 2072 ntBASIC6.27□□□□□ -1.41
CCDC188H7C350 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC188H7C350 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC188H7C350 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CCDC188H7C350 FANCD2P2-201ENST00000437591 1400 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC188H7C350 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC188H7C350 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CCDC188H7C350 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC188H7C350 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CCDC188H7C350 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC188H7C350 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC188H7C350 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC188H7C350 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CCDC188H7C350 RN7SKP205-201ENST00000410999 307 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 RN7SKP279-201ENST00000411383 298 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC188H7C350 AL138479.1-201ENST00000426913 484 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 AC096632.2-201ENST00000438139 1239 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 OR3D1P-201ENST00000438288 955 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 AC073072.2-201ENST00000447425 348 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 SDC4P-201ENST00000453285 601 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC188H7C350 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC188H7C350 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC188H7C350 RNU2-45P-201ENST00000516068 187 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 RNA5SP75-201ENST00000516841 111 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CCDC188H7C350 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC188H7C350 AC103855.4-201ENST00000533158 265 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 AL121594.2-201ENST00000541658 472 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 AC084033.1-201ENST00000550830 633 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 AC126615.2-201ENST00000553003 515 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC188H7C350 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC188H7C350 MIR744-201ENST00000578242 98 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 AC060766.1-201ENST00000590824 627 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 FXYD6P1-201ENST00000604857 285 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC188H7C350 SNORA35B-201ENST00000607417 129 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 AL133481.2-203ENST00000607558 139 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 AC022106.1-201ENST00000612834 766 ntBASIC6.26□□□□□ -1.41
CCDC188H7C350 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC188H7C350 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC188H7C350 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC188H7C350 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC188H7C350 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
CCDC188H7C350 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CCDC188H7C350 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC188H7C350 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.25□□□□□ -1.41
CCDC188H7C350 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CCDC188H7C350 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC188H7C350 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC188H7C350 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC188H7C350 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC188H7C350 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CCDC188H7C350 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CCDC188H7C350 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC188H7C350 RNU6-316P-201ENST00000391027 107 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 RPL11P3-201ENST00000395256 523 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 MRPL32P1-201ENST00000406301 247 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 AL139100.1-201ENST00000408001 498 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC188H7C350 RNA5SP155-201ENST00000411154 129 ntBASIC6.25□□□□□ -1.41
CCDC188H7C350 AC009506.2-201ENST00000420635 840 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms